>PF11597 (286 residues) KASNILTHYYKLAHVGSITYTIYASSENNDQALLELELTIRNKYPEILITYYNKNLYYFA FGHNLINSDSPIDLSTEFHQLSCKSSESVTADQLANPIKNHANNNENLTYAGLSFLKAVK KMILYNLSLNGSIRLFGNYCVSPNDDQSYSILCIDPVLFQNGDLLVSCLEKPNVRLFSSM VAYPEELAIETNFVIYLIPSGIRCHLFDPTNLRNNFIENPQVENEKLPEMLRLTTGIDCD KSKLWVKLIPNLKHLNNQTSFVGKFIHSVDNKKFILWPWDLCLLQF |
![]() | |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KASNILTHYYKLAHVGSITYTIYASSENNDQALLELELTIRNKYPEILITYYNKNLYYFAFGHNLINSDSPIDLSTEFHQLSCKSSESVTADQLANPIKNHANNNENLTYAGLSFLKAVKKMILYNLSLNGSIRLFGNYCVSPNDDQSYSILCIDPVLFQNGDLLVSCLEKPNVRLFSSMVAYPEELAIETNFVIYLIPSGIRCHLFDPTNLRNNFIENPQVENEKLPEMLRLTTGIDCDKSKLWVKLIPNLKHLNNQTSFVGKFIHSVDNKKFILWPWDLCLLQF | |||||||||||||||||||
1 | 3f73A2 | 0.06 | 0.05 | 2.13 | 0.71 | SPARKS-K | GKTEVFLNRFALRPLNRPRLEVVLDPPPGREEVYPLLAQVARRAGGV-TVRMGDGLASW-SPPEVLVLEGTLARMGQTYAYRLYPKGRRPLD---------PKDPGERSVLSALARRLLQERLRRL----EGVWVEGLAVYRREHARGLGGAVLDLWVSDSGAFLLEVDPAYRILCWELLRLDPKELPLEGGRVAWVADPKGLLVPVLTLEDLHEEEGSLARRTREIASWIGRRLGLGTPEAVRA----------------------------------------- | |||||||||||||
2 | 4ei1A2 | 0.07 | 0.05 | 2.13 | 0.75 | FFAS-3D | ------ANFFEMPKIDIYHYELIKPEKCPRRVNREIVEHMVQHDRKPVFDGRK---NLYTAMPLPIGRDKVELEVTRIFKVSIKWVSCVSLQALHDALSGRLVP--------FETIQAL--DVVMRHLPSMRYTPVG-RSFFTASSNPLGREVWFGFHQSLWKMMLNIDVS---------------------ATAFYKAGQRCIKKLTTSTMIRATARSAPDRQEEISKLMRREFGIMVKDEMT------------------------------------------ | |||||||||||||
3 | 3f73A2 | 0.09 | 0.07 | 2.82 | 0.27 | HHpred | GKTEVFLNRFALRPLEELRPWRLEVVLDREEVYPLLAQVARRAG-G-VTVRMGDGLASWSPPEVL-VLEGTLARMGQTYAYRLYPKGRRPLDP----------KDPGERSVLSALARRLLQERLRGVWVE-GLAVY-RREH-ARGPRVLGGAVLDLWVSDSGAFLLEVDPAYRLCEMSLEAWAQG-HP-L--------P-KRVRNAYDRRTWELGE-EDLPG-GLSLLDYHASKGRLQ-GREGGRVAWVADPK----------------DPRKPIPHLTGLLVPVL | |||||||||||||
4 | 3osqA | 0.08 | 0.08 | 3.05 | 0.72 | MUSTER | NLQEPYFTWPLIAADGGYAFKYENHLSHNVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELY------SKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLVQCFSRYPDHMKQHDFF-KSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNGGKYDIKDVGVAGAKAGLTF | |||||||||||||
5 | 4trtA | 0.07 | 0.05 | 2.14 | 0.79 | CNFpred | -----GLTLSGTNLEIDLSCFVPAEVQ-PAHLFAQIVRNLG--GELVELELSGQELSVRSG----------------GSDFKLQTGDIEAYPPLSFPAQADVSL---DGGELSRAFSSVRYAASNEA--VFRGIKLEHARVVASD--GYRVAIRDFPASDGKNLIIPARSV-GEARFTYG-----------DGMLTVTTDRVKMNLKLL-VIPKDIKLQVTLPATALKEAVNRVAVLADKNANNRVEFLVSE---------------------------------- | |||||||||||||
6 | 5up5A | 0.12 | 0.02 | 0.61 | 0.42 | HHsearch-2 | ---------------------TQTQEFDNEEEARKAEKELRKENRRVTVTQEN-GRWRVTWD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6fu4A | 0.12 | 0.12 | 4.04 | 0.92 | Neff-PPAS | RIQRYFDAFQYGKGFSRQILFLRDQAQKRFLDAYDLREDLTRQVRTALAANPEVLGLYVVFEPNALDGKDELFVDQPALGSNDKGRFSLYWAQATPGQLESESIESELADTSSGPSGAAYNAWYTCPKESGQPCVLDPYFDKVGERQLL--TSIAFPLELDGKVIGVGLDINLSNLQALSEQGNRELYDGVGQVGILSPAGLFAGNSRDAGLLKNLAKADPQHAGELLQLLAAGKSRLFNENDDLKVLQPLQPIPGAK-------------------PWGVLLEVP | |||||||||||||
8 | 3if4A | 0.09 | 0.03 | 1.18 | 0.50 | HHsearch | ------------------------------------------------------------------------------------------------------------------------------------------------QGKQEF--VAAIEIDGTGRIHVTPGESQFPYIYREAEVS------------WNES---TRSLHSPVPRE----WS-YAQWQQIFAAAS-EQGVKLGPNTRWVNVPNELRAEL------T----HAAAA-------------- | |||||||||||||
9 | 3osqA | 0.07 | 0.07 | 2.72 | 0.62 | SP3 | EPYFTWPLIAADGG-----YAFKYENHLSHNVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDNHYLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLG-MDELYKGVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTT-----GKLPVPWPTLVTTLVQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDD-GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNFNGGK---------YDI | |||||||||||||
10 | 3dlbA1 | 0.07 | 0.06 | 2.56 | 0.89 | PROSPECTOR2 | HKTEVFLNRFALRPLNPWRLEVLDPPPGREEVYPLLAQVARRAGGV--TVRMGDGLAS---WSPPEVLVLEGTLARMGQTYAYRLYPKGR-----------RPLDPKDPGERSVLSALARRLLQERLRRLEGVWVEGLAVYRREHARGPGWAVLDLWVSDSGAFLLEVDPA--YRILCEMSLEAWLAQGHPLPKRVRNAYDELLRLGEEDPKELPLPGGL-----SLLDYHASKGRLQGREGGRVAWVA-----------------DPKDPRKPIPHLTGLLVPVL | |||||||||||||
|
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |