Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | VIYHCFGGSHSSVTAAAIHLGLLSRHRLPTAAELLALPYFDGRSRGEEGDLKYMGTDAYGNKVYAVGKKNLGARFETFLYNLAAVIGIPRRNILLLNTSPLVNMSMRIGGFISRRMGLTFLGRPLVVWGTRRAFPRLGLFVAENR |
1 | 3oesA | 0.17 | 0.16 | 5.19 | 0.83 | SPARKS-K | | VVILGYRCVGKTSLAHQFVEGEFSEGYDPTVE-----NTYSKIVTEFHLHLVDTGQDEIGVHGYVLVYSVTSLHSFQVIESLYQKLHERVPVVLVGNKADLVQA--VEGKKLAESWGATFMN-----QLTQGIFTKVIQEIARV- |
2 | 1xtsA | 0.15 | 0.14 | 4.88 | 0.65 | FFAS-3D | | IAILGYRSVGKSSLTIQFVEGQFVDSYDPT-----IENTFTKLITVNGQEYHLQLVDTAGQDVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLVISYEEGKALAESWNAAFLESSAKNQTAVDVFRRIILEAEKLE |
3 | 5odcD | 0.14 | 0.11 | 3.75 | 0.33 | HHpred | | IGFCCNWCTYGGADTAGVGRMQYPPS-----IRIIRVMCSGRIEPSLILKAFKEGAD----GVFVGGCHLGGYKWQMMLYELLEELGIEKERLNHEWISASEGEFQNMKDFYNKILGPCKL------------------------ |
4 | 1bu5A | 0.14 | 0.13 | 4.46 | 0.84 | MUSTER | | IVYGSTTG-NTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFD---LVLLGC------TWGDDSIELQDDFIPLFDSLEET-GAQGRKVACFGCYEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGPRAARDDIVGWAHDVR |
5 | 1kzhA | 0.07 | 0.06 | 2.52 | 0.67 | CNFpred | | NAIIIIGGDDSNTNAAILAEYFK----------------------ENIQVIGVPKTIDA-HIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKTLSEIIDEMVSVILKRS |
6 | 6h98A | 0.08 | 0.08 | 2.94 | 0.48 | HHsearch-2 | | VVLYGKFMIGAIRLAFIMMYAGVEDVRVLGYQSWTDFAISKDDVPKT----------TVP--EFGAPIPSRPEFAV-DIDEAKEMLQS--EDSDLVCVRSYPEYIGEVSGAAGRIPGAIFAENYRNHDHTTREYHEIEDIWAKSG |
7 | 5tgzA2 | 0.16 | 0.15 | 5.03 | 0.66 | Neff-PPAS | | IVYGSTTG-NTEYTAETIARE-LADAGY--EVDSRDAASVEAGGLFEGFDLVLLGCSTWGD-----DSIELQDDFIPLFDSLEET-GAQGRKVACFGCGDYFCGAVDAIEEKLKNLGAEIVQDGLRIDGPRAARDDIVGWAHDVR |
8 | 5odcD | 0.14 | 0.12 | 3.98 | 0.44 | HHsearch | | IGFCCNWCTYGGADTAGVGRMQYPPS-----IRIIRVMCSGRIEPSLILKAFKEGAD----GVFVGGCHLGGYKWQMMLYELLEELGIEKERLNHEWISASEGEFQNMKDFYNKILGPCKLKEEL-----DK------------- |
9 | 3tl6A | 0.13 | 0.10 | 3.61 | 0.71 | SP3 | | ---------------------MAKYGEIADPLRVKLLTYLTDVVNSVRGAVGYTGY-YKGVKLSVQAHGMGMPSIGIYAYELFNFYGVKR--IIRIGSAGAFDESLKLGDIVERQYDIPG---KYSCIADFQLCREAVDAAEKLG |
10 | 1g3qa | 0.18 | 0.18 | 5.82 | 0.58 | PROSPECTOR2 | | SIVSGKGGTGKTTVTANLALGDRGRKTMANLSLVLGVDDPDVAGEANVEDAIYM---TQFDNVYVLPGAVDWEHVLKAPRKLPEVIKSLKDDFILIDCPAGLQLDAMSAMAAEDVMEVTLEGIPAVKYKGAKAFVKLAEEIEKLA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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