Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | AKGSYFADSFSCEVPNKGQTALDVYLEIAKQTPAWISFLMAMRNRIVSMFGLKHLGRLQDATMDIEPDHLKVGDRLGIFTLVSNTDDEIVLEDRDKHLDVRVSFLLDPQREKVTVHATTVVHVHNRWGKAYMLFVAPVHKIIVPS |
1 | 4igvA | 0.10 | 0.09 | 3.30 | 1.10 | SPARKS-K | | --DLSGKMVKQVEI---LSDGIVFYEIFRYRLYLISEMS---------PVNIQGVDLLEG---NWGTVGSVIFFKYTIDIVEAIDEKSVTFKIVEGDLTFIIIVQVDTKGEHNSVTWTFHYEKLVEEPNTLMNFCIEITKDIETY |
2 | 3ijtB | 0.12 | 0.10 | 3.68 | 1.15 | MUSTER | | MGRGSMKFSFELAVNTKKEDAWTYYS--VNQWFVWEGDLEQIS-------------EGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPGTISLRHSVSLTD--SDTTEEALAFLKQIFADVPE |
3 | 3ijtB | 0.13 | 0.12 | 4.07 | 1.32 | Neff-PPAS | | MGRGSMKFSFELAVNTKKEDAWTYYSQ-VNQWFVWEGDLEQISL------------EGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDG-TISLRHSVSLTDSDTTEEALAFLKQIFADVPE |
4 | 4rehA | 0.12 | 0.10 | 3.68 | 1.06 | SPARKS-K | | --GLTGKLICQTGIK---SDGDVFHELFGTR-----------PHHVPNITP-ANIQGCDLHEGEFGKVGSVVIWNYSIEEIVAIDEKSVTFKVVEGHLSIVFSVHVDTKGEDNLVTWSIDYEKLNKDPTSYLDFLLSVTRDIEAH |
5 | 4rehA | 0.09 | 0.08 | 2.94 | 0.67 | FFAS-3D | | --------ICQTGIKSDGDVFHELFGTRPHHVPNIT-------PANIQGCDLHEGEFGKVGSVVIWNYSIDGNAMIAKEEIVAIDEEDKSVTFKVEFKSIVFSVHVDTKGEDNLVTWSIDYEKLNEYLDFLLSVTRDIEAHHLP- |
6 | 2pcsA | 0.12 | 0.10 | 3.66 | 0.39 | HHpred | | ------NGNGSIELK---GTVEEVWSKLMSILSKCIMG-------CKSLELIG-EDKYKAD--LQIGIAAVKGKYDAIIEVTDIKPYHYKLLVNGEFVNAEGVIDLTPINDCTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISD |
7 | 2ns9A | 0.15 | 0.13 | 4.44 | 1.00 | MUSTER | | VWGLKVRYEGSFEV---SKTPEEVFEFLTD--PKRFSRAFP---------GFKSVEVEDGSFTIELRLSLGPGDARVRASFEDLEKPKGSGRGAGSTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMIND |
8 | 2luzA | 0.09 | 0.07 | 2.63 | 0.79 | CNFpred | | --GEARSIIIRQRYD---APVDEVWSACTDPINRWFIEP---------------------------KGDLREGGNFASGDILRCEPRRLTISWVY-KPDSEVELRLSEEGDGTLLELEHATTSLVEVGVGWEMALDFLGMFIRGD |
9 | 2ns9A | 0.13 | 0.12 | 4.06 | 0.89 | HHsearch-2 | | VWGLKVRYEGSFEVS---KTPEEVFEFLTKRFSRAFPGFKS-----VEVED----GSFTI----ELRLSLGLRDARVRASFEDLEKPSATVKGSGRTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMIND |
10 | 2ns9A | 0.09 | 0.08 | 3.16 | 1.11 | Neff-PPAS | | VWGLKVRYEGSFEVSKTPEEVFEFLTD-----------PKRFSRAFPGFKSVEVEDGSFTIELRLSLGPLRGDARVRASFEDLEKPSKATVKGSGRTLDFTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMIND |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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