>PF11051 (275 residues) GKGIAITVNPDDVEFMIRLFRVLKELGNTYPIQVIQKGGELTSPLIEQIKKTAIETNQAV SIVDLSPILDEKFAREQITSFHNKFFAAMFNTFEEVLLLDADVVPYVSLDEFFNLKGYKD TGLQFWRDRNRGSDTHKFCSNLGVYLEPSLEEHNLLGTELKFRINSLAKKKVRSSEERAF HRFFNELKVHNIDSGIIVFNKKQKLHSLIMGEIFYTNGRFGRCAYGDKEMFMMGAFATGA DFIIDPRDAGIIGPIGYNIDQRVNFICSAQMGHLD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | GKGIAITVNPDDVEFMIRLFRVLKELGNTYPIQVIQKGGELTSPLIEQIKKTAIETNQAVSIVDLSPILDEKFAREQITSFHNKFFAAMFNTFEEVLLLDADVVPYVSLDEFFNLKGYKDTGLQFWRDRNRGSDTHKFCSNLGVYLEPSLEEHNLLGTELKFRINSLAKKKVRSSEERAFHRFFNELKVHNIDSGIIVFNKKQKLHSLIMGEIFYTNGRFGRCAYGDKEMFMMGAFATGADFIIDPRDAGIIGPIGYNIDQRVNFICSAQMGHLD | |||||||||||||||||||
1 | 5mu1A2 | 0.09 | 0.08 | 2.92 | 1.07 | SPARKS-K | EINIFSVASGLYERMLNIMMASVMHHTNH-TVKFWFIEQFLSPSFKDFIPHMAAEYGFKYEMVTYKWPHWRQQKEKQREIWGYKILFLDVLSLDKVIFVDADQIVRTDMYDLVEHP-LDGAPYGFAPMCDSRVEM----------------------------------EGYRFWKTGYWANYLKGKP--YHISALYVVDRELAAGDRLRQQYHALSADPNSLANLDQDLPNHM--QFTIPIATLPQEWLWCETWSDETLKDARTIDLCNNPMTK | |||||||||||||
2 | 1ll0B1 | 0.13 | 0.08 | 2.65 | 1.15 | FFAS-3D | ---VTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLT-TPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDC--------------------------------------------------------------FNSGVFVYQPSVETYNQLLHVASEQG----SFDGGDQGLL-------------------------------------------- | |||||||||||||
3 | 5gvvA | 0.11 | 0.09 | 3.14 | 0.68 | HHpred | KRAVVFAGDYAYIRQIETA-KSLCRHNSHLKIYLLNQ--DIPQEWFSQIRIYLQE-GGDLIDCKLIGS-------Q-FHTFARYFIPDFVTE-DKVLYLDSDLIVTGDLTDLFELDVGFNAGVLLINNKKWGETIRQKLIDLTEKENVEEGDQSILN-L--FKDQYSSLDQFQIGYDY--GAATFKHQFIF-DIPL--EPL---------PLILHYISPWQFSVGRLREVWWEYS--LDSVILNEWF---------------------------- | |||||||||||||
4 | 1ll0B1 | 0.15 | 0.09 | 3.20 | 1.05 | MUSTER | TDFVTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQ-VSDTMRKALEIVFDEV-ITVDILDSGDSAHLTLMKPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREEL-----SAAPD----PGWPDCFNSGVFVYQPSVETYNQLLHVAS------EQGSFDGGDQGLLNTFFNSWATTD----------RKHL---------------------------------------------------------------------- | |||||||||||||
5 | 5h18A | 0.08 | 0.06 | 2.40 | 1.29 | CNFpred | DINIFSVASHLYERMLNIMMVSVMKH-TKHSVKFWFIEQFLSPSFKKFLPHLAKEYGFSYEMVTYK--WPHWLRGQREKQREIWGYKILFL-LDKVIFVDADQIVRTDMYDLVQLD-LEGAPYGFTPMCDSRK----EMEGFRFWK------------------------------QGYWKSHLR---RPYHISALYVVDLNRFRALAAGDRLRGQYHTLSA-ANLDQDLPNNMQAM--IPIKSLP----------------------------- | |||||||||||||
6 | 1ll0B1 | 0.11 | 0.07 | 2.49 | 1.35 | HHsearch-2 | DQAFVTLTTDAYAKGALVLGSSLKQHRTSRRLAVLTTP-QVSDTMRKALEIV----FDE--VITVDILDSGDSKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREEL---SAA--PDP---------------------------------------------------------GWPDCFNSGVFVYQPSVETYNQLLHV-ASEQG---SFDGGDQGLLNTFFNSTDIRKHL------------------------------- | |||||||||||||
7 | 1ll0B1 | 0.12 | 0.08 | 2.70 | 1.49 | Neff-PPAS | --FVTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLT-TPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPD--------------------------------------------------------------CFNSGVFVYQPSVETYNQLLHVASEQGSFD----GGDQGLLNTFFNSWATRKHL------------------------------- | |||||||||||||
8 | 1ll0B1 | 0.13 | 0.08 | 2.65 | 2.02 | HHsearch | DQAFTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTP-QVSDTMRKALEIV----FDE--VITVDILDSGDSKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREDCFNSGVFVYQPSVET---YNQLLHVASEQ----------GS---F----------DGGDQGLLNTFFNS--WATTDIR-------KHL---------------------------------------------------------------------- | |||||||||||||
9 | 1ga8a | 0.11 | 0.09 | 3.27 | 1.18 | PROSPECTOR2 | D--IVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPE-DFAGFPLNIRHISITTYARLKADCDKVLYLDIDVLVRDSLTPLWDTD-LGDNWLGASIDLFVERQEG-------------------------------------------YKQKIGADGEYYFNAGVLLIN-LKKWRRHDIFKSSEWVEQYKDVQYQDQDILNGLF---KGGVCYAFASRHTDPLYRDRTNTVPVAVCTAWGAERL | |||||||||||||
10 | 1ll0B1 | 0.12 | 0.05 | 1.91 | 0.85 | SAM | ---VTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTP-QVSDTMRKALEIV------FDEVITVDILDSGDSKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCF------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |