>PF10325 (264 residues) ICYIVLMLIFFGLLPFYVYVNKVNRVRDESIFIFPITNHFYEMVKKAYFLFLYLVVSFIL CFVFGLNDSNYCVPAFCTSCITCFALYIIVQVFHLLISLLAVQRLVIYFVPSMEKQTIWV QNKLYGNIWYIYIAFGLKESIGIVCLFVCEVAACSPSKQMTFRIFYMSTFFFLNAFLVTS ALLYIPITLSIWKLTSLTMNQDKPQKYIFFQTVVIFIFKAACVPALIAFIFCDYSINVSI VFVASMDIIIIPLIIQISYLGCNK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | ICYIVLMLIFFGLLPFYVYVNKVNRVRDESIFIFPITNHFYEMVKKAYFLFLYLVVSFILCFVFGLNDSNYCVPAFCTSCITCFALYIIVQVFHLLISLLAVQRLVIYFVPSMEKQTIWVQNKLYGNIWYIYIAFGLKESIGIVCLFVCEVAACSPSKQMTFRIFYMSTFFFLNAFLVTSALLYIPITLSIWKLTSLTMNQDKPQKYIFFQTVVIFIFKAACVPALIAFIFCDYSINVSIVFVASMDIIIIPLIIQISYLGCNK | |||||||||||||||||||
1 | 6m9tA2 | 0.08 | 0.08 | 3.14 | 1.42 | SPARKS-K | VSVAFPITMLLTGFVGNALAMLLVSRSYRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASH-MKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTSTNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRGSWGRITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNEKQKECNFFLIAVRLASLNQILDPWVYLLLRK | |||||||||||||
2 | 6m9tA2 | 0.12 | 0.12 | 4.15 | 1.62 | FFAS-3D | AFPITMLLTGFVGNALAMLLVSRSYRRRESK-RKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASH-MKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTSTNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRGSWGRITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNEKQFFLIAVRLASLNQILDPWV----YLLLRK | |||||||||||||
3 | 6m9tA2 | 0.08 | 0.08 | 3.14 | 1.31 | MUSTER | VSVAFPITMLLTGFVGNALAMLLVSRSYRRRE--KSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASH-MKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTSTNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRGSWGRITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNEKQKECNFFLIAVRLASLNQILDPWVYLLLRK | |||||||||||||
4 | 3rkoB | 0.09 | 0.08 | 3.20 | 1.36 | CNFpred | LSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGL---CSYLLIGFYGAAAMKAFVVTRVGDVFLAFALFILYLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAM---------AGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHVGIVGAVTLLLAGFAALAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC | |||||||||||||
5 | 6m9tA2 | 0.08 | 0.08 | 3.14 | 1.54 | Neff-PPAS | VSVAFPITMLLTGFVGNALAMLLVSRSYRRRKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASH-MKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGISTNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRGSWGRITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNEKQKECNFFLIAVRLASLNQILDPWVYLLLRK | |||||||||||||
6 | 5tjvA1 | 0.14 | 0.13 | 4.54 | 1.16 | PROSPECTOR2 | LNPSQQLAIAVLSLTLGLCVILHSRSLRCR-----PSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASV-----GSLFLAAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILWKAGKRAMSFSDQARMDIRLAKTLVLILVVGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSK | |||||||||||||
7 | 3d4sA1 | 0.15 | 0.14 | 4.73 | 1.41 | SPARKS-K | GMGIVMSLIVLAIVFGNVLVITAIAKRLQTV-----TNYFITSLACADLVMGLAVVPFGAAHILM-KMWTF---GNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSL-LTKNKARVIILMVWIVSGLTSFLPIQAINCYAEETCC-DFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLL---KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPD | |||||||||||||
8 | 5tgzA1 | 0.11 | 0.11 | 3.80 | 1.61 | FFAS-3D | VLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGS-----LAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASV-----GSLFLAAIDRYISIHRP-LAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLL-GWNCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAPDQARMDIELAKTLVLILVVLIICWGPLLAIMVYDVFGVFAFCSMLCLLNSTVNPII----YALRSK | |||||||||||||
9 | 3uonA1 | 0.12 | 0.12 | 4.12 | 1.18 | MUSTER | LVAGSLSLVTIIGNILVMVSIKVNRHL--------VNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWP----LGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVK-RTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFAAVTFGTAIAAFYLPVIIMTVLYWHISRASK-SRREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYWLCYINSTINPACYALCNA | |||||||||||||
10 | 3rkoC | 0.12 | 0.12 | 4.13 | 1.36 | CNFpred | DGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLV---PMYFLIALWGHRITAATKFFIYTQASGLVMLIAILALVFVHYVWTFNYEELL-GVEYLLMLGFFIAFAVKMPHGWLPDAHSQA-------PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |