>PF10320 (264 residues) TIGVIGNTIMVLCCAMTKRLRSPCHFLISLTCLIDAFHICGQYPFIYQFFTGCKPYQLIP VTSSQSECYFMLILPIIGYTAGGPLILAMGIDRFIAVTFPTSYRYYQQSSAKYLALQLIF PTFYTSFFLVFGFLERDINEQITCANPLALKGASFQWYNYTCAFIYVAIFFVYFRVYFLL KHSQTSSRFKSVFRSILVTVSFVLLGWATTTIANSSSYSVTDNLDTAHLIQTYAGITVNF AAASNVFVFYSINSEYREAIQKLF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | TIGVIGNTIMVLCCAMTKRLRSPCHFLISLTCLIDAFHICGQYPFIYQFFTGCKPYQLIPVTSSQSECYFMLILPIIGYTAGGPLILAMGIDRFIAVTFPTSYRYYQQSSAKYLALQLIFPTFYTSFFLVFGFLERDINEQITCANPLALKGASFQWYNYTCAFIYVAIFFVYFRVYFLLKHSQTSSRFKSVFRSILVTVSFVLLGWATTTIANSSSYSVTDNLDTAHLIQTYAGITVNFAAASNVFVFYSINSEYREAIQKLF | |||||||||||||||||||
1 | 3d4sA1 | 0.16 | 0.15 | 5.03 | 2.36 | SPARKS-K | LAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKM------WTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQCYAEET-----CCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQL--LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR--KEVYILLNWIGYVNSGFNPLIYCRS-PDFRIAFQELL | |||||||||||||
2 | 5tgzA1 | 0.12 | 0.12 | 4.24 | 3.05 | FFAS-3D | TFTVLENLLVLCVILHSRSLRCPSYHFIGSLAVADLLGSVIFVYSFIDF-------HVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAPDQARMDIELAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKLIKTVFAFC-SMLCLLNSTVNPIIYALRSKDLRHAFRSMF | |||||||||||||
3 | 4rnbA | 0.14 | 0.13 | 4.43 | 4.68 | HHpred | VVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATVVDITET-------WFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHP------STAKRARNSIVIIWIVSCIIMIPQIVMECSKTTLFTVCDERWGGEPKMYHICFFLVTYMLCLMVLAYLQIFRKLWCRQGIRARRKTARMLMVVLLVFAICYLPISILNVLKRVFGHDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAF | |||||||||||||
4 | 3pblA1 | 0.15 | 0.15 | 4.96 | 2.36 | MUSTER | LAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGV-----WNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISN--PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTH-CQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKIL | |||||||||||||
5 | 4buoA | 0.13 | 0.13 | 4.46 | 1.68 | CNFpred | VVGTVGNSVTLFTLARKKSLQSTVDYYLGSLALSDLLILLLAMPVELYNFIW----VHHPWAFGDAGCRGYYFLRDACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNPGGLVCTPIVTLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVM-RVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQVFLSTL | |||||||||||||
6 | 5zbhA | 0.17 | 0.16 | 5.36 | 0.82 | HHsearch-2 | ILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTVYTLMDH-------WVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWRP--NNRHAYVGIAVIWVLAVASSLPFLIYQVMTDKDKYVCFDQFPSDRLSYTTLLLVLQYPLCFIFICYFKIYIRLKRRNISSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQITCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFF | |||||||||||||
7 | 3pblA1 | 0.15 | 0.14 | 4.86 | 2.56 | Neff-PPAS | LAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVT-----GGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSIS--NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTH-CQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKIL | |||||||||||||
8 | 5zbhA | 0.17 | 0.16 | 5.26 | 1.31 | HHsearch | ILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTVYTLMDH-------WVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWRP--NNRHAYVGIAVIWVLAVASSLPFLIYQVMTDKDKYVCFDQFPSDSLSYTTLLLVLQYFLCFIFICYFKIYIRLKRRNISSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQITCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFF- | |||||||||||||
9 | 3pblA1 | 0.16 | 0.15 | 5.06 | 2.24 | PROSPECTOR2 | LAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGG-----VWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGCRRVALMITAVWVLAFAVSCP-LLFGFNTTGDPTVCSISNP--DFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELY-SATTWLGYVNSALNPVIYTTFNIEFRKAFLKIL | |||||||||||||
10 | 6e59A | 0.15 | 0.15 | 4.95 | 3.27 | SAM | VTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNTYAVHNE-------WYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTTETPSRVVCMIEWPEHEKVYHICVTVLIYFLLVIGYAYTVVGITLWASEGVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |