>PF10318 (289 residues) IHFLSRFLHTVATIGTPLLIYSLYCILMRSKNSLKIMKWDLLTLHLVNISFHYFISALAS PYVMLPAIAGSPFGIMKHFLIPCNVQIYMSTVVVISSPVFYERWYYELFRKKSKTWGRVR KWWIAFHYFGVIGIVGFAASEAPDQAESIDMIFKHLPCLPDYFHTSPIFVLSDKFSTIVI AFTVLVLIVASEDIFFTMLTLLFTSEELHSGKLSTQTFQSQTRFLCKLHLQVLIPLPTLI LPLTYAILSIIGDYYNQVFNNLFVISASFHGVVSSLVLIILHSEYRRPL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | IHFLSRFLHTVATIGTPLLIYSLYCILMRSKNSLKIMKWDLLTLHLVNISFHYFISALASPYVMLPAIAGSPFGIMKHFLIPCNVQIYMSTVVVISSPVFYERWYYELFRKKSKTWGRVRKWWIAFHYFGVIGIVGFAASEAPDQAESIDMIFKHLPCLPDYFHTSPIFVLSDKFSTIVIAFTVLVLIVASEDIFFTMLTLLFTSEELHSGKLSTQTFQSQTRFLCKLHLQVLIPLPTLILPLTYAILSIIGDYYNQVFNNLFVISASFHGVVSSLVLIILHSEYRRPL | |||||||||||||||||||
1 | 4n6hA2 | 0.10 | 0.09 | 3.44 | 1.71 | SPARKS-K | AIAITALYSAVCAVGLLGNVLVMFGIVRY--TKMKTTNIYIFNLALADALATSTL-----PFQSAKYLMET-----WPFGAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKDFRTP----------AKAKLINICIWVLSGVGVPIMVMA---VTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCF | |||||||||||||
2 | 3capA | 0.14 | 0.12 | 4.25 | 1.74 | FFAS-3D | --MLAAYMFLLIMLGFPINFLTLYVTV-QHKKLRTPLNYILLNLA----VADLFMVFGGFTTTLYTSLHGYVFGPTG-CNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPYYTPHEETNNESF-------------------------VIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIA-FLICWLPYAGVAFYIFTSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM | |||||||||||||
3 | 3capA | 0.16 | 0.15 | 4.85 | 0.65 | HHpred | FSMLAAYMFLLIMLGFPINFLTLYVTVQH--KKLRTPLNYIL-LNL--AVADLFMVFGGFTTTLYTSLHGYVFGPTG-----CNLEGFFATGGEWSLVVLAIERYVVVCKPSNRFGENHAIMGVAFTWVMALACAAPPLVGWSRYI------PEGMQCSIDYYTPHEE---TNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVII-MVIAFLICWLPYAGVAFYIFGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM | |||||||||||||
4 | 3c9lA | 0.13 | 0.12 | 4.31 | 1.30 | MUSTER | FSMLAAYMFLLIMLGFPINFLTLYVTVQH--KKLRT---PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYVFGPTGCN-LEGFFATLGGEIALWSLVVLAIERYVVVCKSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSR------YIPEGMQCSCGIDYYTPH---TNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM | |||||||||||||
5 | 3rkoC | 0.07 | 0.07 | 2.68 | 1.47 | CNFpred | ---IHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWG-AATKFFIYTQASGLVMLIAILALVFVHYNVWTFNYEEL-EYLLMLGFFIAFAVKMPVVPLH----GWLPDAHSQA-----------------PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP-IAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERI | |||||||||||||
6 | 3capA | 0.16 | 0.15 | 4.94 | 0.82 | HHsearch-2 | EPMLAAYMFLLIMLGFPINFLTLYVTVQHKKLR-TPLNYILLNLA----VADLFMVFGGFTTTLYTSLHGY-------FVFGPTGCNLFATIALWSLVVLAIERYVVVCKPSNFRFGENHAIMVAFTWVMALACAAPPLVGWSRYIPE----GMQCSCGIDYY-T-P----HEETNNEVIYFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLIC-WLPYAGVAFYIFTHQFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM | |||||||||||||
7 | 3dqbA | 0.11 | 0.11 | 3.85 | 1.66 | Neff-PPAS | FSMLAAYMFLLIMLGFPINFLTLYVTVQH-----KKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEE-------TNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM | |||||||||||||
8 | 3capA | 0.16 | 0.15 | 4.84 | 1.15 | HHsearch | FSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLR-TPLNYILLNL----AVADLFMVFGGFTTTLYTSLHG-------YFVFGPTGCNFFATIALWSLVVLAIERYVVVCKPSNFRFGENHAIGVAFTWVMALACAAPPLVGWSRYIP--EG--MQCSCGID-YYT-P----HEETNNEVIYFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLIC-WLPYAGVAFYIFTHQFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNC- | |||||||||||||
9 | 3dqbA | 0.12 | 0.11 | 3.94 | 1.38 | PROSPECTOR2 | MSMLAAYMFLLIMLGFPINFLTLYVTVQ--HKKLRTPLNYIL---LNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSR-------YIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVII-MVIAFLICWLPYAGVAFYIFTHDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM | |||||||||||||
10 | 4z34A | 0.09 | 0.08 | 2.94 | 0.84 | SAM | --LVMGLGITVCIFIMLANLLVMVAIYVNRRFH-FPIYYLMANLA----AADFFAGLAYFYLMFNTGPNTRRLTVSTWL--LRQGLIDT--ASVANLLAIAIERHITVFR-LHRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNC-------ICDIENCSNMAP---------LYSDSYLVFWAIFNLVTFVVMVVLYAHIFGYVAD------KYLRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQDVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |