>PF10316 (266 residues) INTVGISAFILSLSNVLLNFYLIFSIFILKKVPKKADWTLIYCRFVVDMFYSLDTTTYLG YFLIRLVDPTIVIKNLAFYIAWPNFNLGTMRCWIVFFIGLDRVLATCAPISYHNNRSKIP TLAFFLFILSYTVFEYYILLVLCSFELDVPLDCTIFRCAVGTCYHDYWKWYQQIMYSFVG FLSIILFFRLFIWNSFTKNVVNKTISRATRISLLDSFIIFAFDFFPVFLTAQWPQYNTTT VGPLGSLCKSLGFVIESTIICHVLIG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | INTVGISAFILSLSNVLLNFYLIFSIFILKKVPKKADWTLIYCRFVVDMFYSLDTTTYLGYFLIRLVDPTIVIKNLAFYIAWPNFNLGTMRCWIVFFIGLDRVLATCAPISYHNNRSKIPTLAFFLFILSYTVFEYYILLVLCSFELDVPLDCTIFRCAVGTCYHDYWKWYQQIMYSFVGFLSIILFFRLFIWNSFTKNVVNKTISRATRISLLDSFIIFAFDFFPVFLTAQWPQYNTTTVGPLGSLCKSLGFVIESTIICHVLIG | |||||||||||||||||||
1 | 4iaqA1 | 0.13 | 0.12 | 4.30 | 1.94 | SPARKS-K | KVLLVMLLALITLATTLSNAFVIATVYRTRKLHT-PANYLIASLAVTDLLVSILVMPISTMYTVTGRWTL--GQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPP-----FFWRQASECVVNTDH-----ILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIIQKYLLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPLAIFDFFTWLGYLNSLINPIIYTMSNED | |||||||||||||
2 | 6m9tA2 | 0.11 | 0.11 | 3.91 | 2.27 | FFAS-3D | -SVSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHISGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGT----WCFISTNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRGSWGRITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNEKQKECIAVRLASLNQILDPWVYLLL--- | |||||||||||||
3 | 5tgzA | 0.12 | 0.12 | 4.12 | 1.85 | HHpred | -LAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDF---HVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNC-EKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAVAKAPDQARMDIELAKTLVLILVV-LIICWGPLLAIMVYDVFLIKTVFAFCSMLCLLNSTVNPIIYALRSKD | |||||||||||||
4 | 3d4sA1 | 0.12 | 0.12 | 4.22 | 1.64 | MUSTER | VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVT-NYFITSLACADLVMGLAVVPFGAAHILMKMWT--FGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQINCYEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLL-----KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRILLNWIGYVNSGFNPLIYCPDFRI | |||||||||||||
5 | 3rkoC | 0.10 | 0.09 | 3.37 | 1.44 | CNFpred | SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGAATKFFIYTQASGLVMLIAILALVFVHYTFNYEELLNT-GVEYLLMLGFFIAFAVKMPVVPLH----------GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAE-------QTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTR | |||||||||||||
6 | 5xszA | 0.12 | 0.12 | 4.11 | 0.78 | HHsearch-2 | YPLYSMVFSIVFMVGLITNVAAMYIFMCSLKLRN-ETTTYMMNLVVSDLLFVLTLPLRVFYFVQQWP----FGSLLCKLSVSLFYTNMYGSILFLTCISVDRFLAIVYPFRSRGLRTKRNAKIVCAAVWVLVLSGSLPTGFMLNSTNNNSISCFEWK----SHLSKVVIFIETVGFMLNVVCSAMVLQTLRRPNTVNIFDAYLNKKKILRMIIVHLF-IFCFCFIPYNVNLVFYSLVVRTIYPIALCIAVSNCCFDPIVYYFTSET | |||||||||||||
7 | 4grvA1 | 0.13 | 0.13 | 4.44 | 1.94 | Neff-PPAS | KVLVTAIYLALFVVGTVGNSVTLFTLAR-KSLQS-TVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWFLFDFYHYFYMLTNALAYASSAIN | |||||||||||||
8 | 5xszA | 0.12 | 0.12 | 4.11 | 1.22 | HHsearch | YPLYSMVFSIVFMVGLITNVAAMYIFMCSLKLRN-ETTTYMMNLVVSDLLFVLTLPLRVFYFVQQWPF----GSLLCKLSVSLFYTNMYGSILFLTCISVDRFLAIVYPFRSRGLRTKRNAKIVCAAVWVLVLSGSLPTGFMLNSTNNNSISCFEWK----SHLSKVVIFIETVGFMLNVVCSAMVLQTLRRPNTVNIWDAYLNKKKILRMIIVHLFI-FCFCFIPYNVNLVFYSLVVRTIYPIALCIAVSNCCFDPIVYYFTSE- | |||||||||||||
9 | 3pblA1 | 0.13 | 0.13 | 4.41 | 1.64 | PROSPECTOR2 | YAL---SYCALILAIVFGNGLVCMAVLKERALQT-TTNYLVVSLAVADLLVATLVMPWVVYLEV-TGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISN-------PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALFLKILSC | |||||||||||||
10 | 3emlA | 0.10 | 0.10 | 3.59 | 1.71 | SAM | --VYITVELAIAVLAILGNVLVCWAVWLNSNLQN-VTNYFVVSLAAADIAVGVLAIPFAITISTGFCA----ACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCQSQGCGEGQVACLFEDVVPMYMVYFFFACVLVPLLLMLGVYLRIFLAARRAYRSTLQKEVHAAK-SLAIIVGLFALCWLPLHIINCFTFHAPLWLMYLAIVLSHTNSVVNPFIY------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |