>PF10234 (269 residues) RALGYPRLISMENFRTPNFPLVAEVLIWLVKRYEPNADLPMDVDTEQDRVIFIKSVAQFM ATKAHIKLNTKKLYQADGYAVKELLKVTAMLYNAMKTNTGQQEEEQEEETTAMSFDISSR IADLKASRQLASEITTKGASLYDLLGREVELREQRSVAINKPLEINEIEKHLKVSIRAVE QEIKKTEHMLNNVASDEANLDAKISKKKLELERNRKRLQTLQSVRPAFMDEYERLEEDLQ KQYESYLQKFRNLGYLEQQLEEHNRAEQD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | RALGYPRLISMENFRTPNFPLVAEVLIWLVKRYEPNADLPMDVDTEQDRVIFIKSVAQFMATKAHIKLNTKKLYQADGYAVKELLKVTAMLYNAMKTNTGQQEEEQEEETTAMSFDISSRIADLKASRQLASEITTKGASLYDLLGREVELREQRSVAINKPLEINEIEKHLKVSIRAVEQEIKKTEHMLNNVASDEANLDAKISKKKLELERNRKRLQTLQSVRPAFMDEYERLEEDLQKQYESYLQKFRNLGYLEQQLEEHNRAEQD | |||||||||||||||||||
1 | 5xg2A | 0.15 | 0.13 | 4.26 | 1.36 | FFAS-3D | ---------AIVRWGKRKEKLIEE----IRAREEERNALVVRLGEIDRTFAVAREEFDTVVARKSLYEGEARIKRAEE----EKERLKAEILTGEAR----------------LPGLRERAENLRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALEN--PEARELTEKIRAVEKEIAALREELSRVEGKLEG------- | |||||||||||||
2 | 5nnvA | 0.13 | 0.10 | 3.62 | 1.21 | MUSTER | --------------------------------------------AKEEELAESSAISAKEAKIED----TRDKIQALDESVDELQQVLLVTSEELEK-LEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS-STSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKE | |||||||||||||
3 | 5nnvA | 0.09 | 0.08 | 2.94 | 1.51 | Neff-PPAS | ---------------------------------------------KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS-STSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQK | |||||||||||||
4 | 6ek4A | 0.10 | 0.09 | 3.47 | 1.09 | PROSPECTOR2 | --VVYP---------EINVKTLSQAVKNIWRLSHQQKSGIEIIQEKTLRISYFLTLTEIDTELEDPELDDETRNTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADVSNVVILERLESLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDANPKKELIKQAIKQGVEIAKKILIELADARAKLDERINQINKDCDDLKIQLKGVEQRIAGIEDVRTTLLLQAAKLEQAWNIFAKQLQNTIDGLDFLDDLALQYHSMLLS | |||||||||||||
5 | 4ci6B2 | 0.15 | 0.12 | 4.03 | 0.90 | SPARKS-K | ---------------------------------------VRRI-TPYYLRELSDLLRTHLSSAATKQLDM-------GVVLSDLDTMLVALDKAERE-GGVDKDQLKSFNSLILYILSIVEPSLQRIQKHLFSDIGSLMRAHKHLETLLEVLVTLSQQGQPVSETYSFLNRLAEAKVTLSQQLNTLQQQQESAKAQLSILINRSDVARQSLQRFDHAAITLQEVS-EFTDDMRNFTADSIPLLIQLVEQREKLRELTTIAERLNRLERE | |||||||||||||
6 | 6djlB | 0.13 | 0.09 | 3.25 | 1.32 | FFAS-3D | ---------------------------------DPR------IQGELEKLQSTDDINRRETELEDARQKFRSVLVEATVKLDELVKKSKPYWEAR-----------------------RVARQAQLEAQKATQDFQRATEVLRAAKETISLAEQRLLE----DDKRQFDSAWQEMLNHATQRVMEAEQTKTRSELVHKETAARYNAAMGRMRQLEKKLRAINKSKPYFKKTVDDLQAKLTLAKGEYKMALKNLEMISDEIHERR----- | |||||||||||||
7 | 5td8A | 0.14 | 0.12 | 3.93 | 0.56 | HHpred | KKNKFDHPISIKFLKQPTQKGFIIIFKWLYLRLDPGYGFTK--SIENEIYQILKN------LRYPFSINKSQISAVGGSNWHKFLGMLHWMVRTNIKLDMCLNKVDQNTQTLDEQDRQERY-EL-MVEKLLIDYFT----------------ESYKSFLKLEDNYEPSMQELKLGFEKFV---HIINTDVTSTELKLE-------ELKVDLNRKRYKLH-----------QQVIHVIDITSKFKINIQSS--LENSENELGNVIEELR- | |||||||||||||
8 | 4tqlA | 0.14 | 0.11 | 3.84 | 1.03 | MUSTER | -----------------------------------YKQMVQELEKARDRMEKLYKEMVELIQKA-----MRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGG-----DKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLEMKKMKEKMEKLLKEMKQRMEEVKKKMELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG-- | |||||||||||||
9 | 5j1iA | 0.12 | 0.11 | 3.78 | 0.85 | CNFpred | -------------------EGLGKGVARLSAEAE-----SPAAPTLRSELELTLGKLEQVRSLSA--IYLEKLKTIS-LVIRGTQGAEEVLRAHEEQLKEAQAVPAT------LPELEATKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGRDVEVERWRERVAERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-REQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVT | |||||||||||||
10 | 5td8A | 0.12 | 0.10 | 3.53 | 0.60 | HHsearch-2 | KKNKFDHPISIKFLKQPTQKGFIIIFKWLYLRLDPGYGFTK--SIENEIYQILKN------LRYPFSINKSQISAVGGSNWHKFLGMLHWMVRTNIKLDMCLNKVDRSLITLDEQQRQERY-EL-MVEKLLIDYFTESYKSF----------------LKLEDNYEPSMQELKLGFEK---FVHIINTDVTSTELKLEELKVDLNRKRYK-------LH-----------QQVIHVIDITSKFKINIQSS--LENSENELGNVIEELRN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |