>PF10228 (252 residues) GLQLVGPFDILAGKHKTKKKSTGPNFNLHWRFYYDPPEFQTIIIGDNKTQYHMGYFRDSP DELPVYVGINEAKKNCIIVPNGDNVFAAVKLFLMKKLKEVMDKKKTNLLKNIDEKLTETA RELGYSLEQRTMKMKQRDKKVVTKTFHGAGLVVPVDKNDVGYRELPETDANLKRICKTIV EATNDEERLKAFAPIEEMMTFVQFANDECDYGMGLELGMDLFCYGSHYFHKVAGHLLPLA YKLLKRNLFAEI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | GLQLVGPFDILAGKHKTKKKSTGPNFNLHWRFYYDPPEFQTIIIGDNKTQYHMGYFRDSPDELPVYVGINEAKKNCIIVPNGDNVFAAVKLFLMKKLKEVMDKKKTNLLKNIDEKLTETARELGYSLEQRTMKMKQRDKKVVTKTFHGAGLVVPVDKNDVGYRELPETDANLKRICKTIVEATNDEERLKAFAPIEEMMTFVQFANDECDYGMGLELGMDLFCYGSHYFHKVAGHLLPLAYKLLKRNLFAEI | |||||||||||||||||||
1 | 4uosA | 0.16 | 0.10 | 3.42 | 0.59 | SPARKS-K | -----------------------------------------------------------------------------------GDNEEVKKMLEKMIEEIKKKKVKEMLEKMIKEIKKMLEN-GEDSEKILKKAKEMAEKMVIELAEKIEMAEKILKKELG-----VDNEEVKKMLEKMIEEMLEKAIKKVKEMLEKMIKEIKKMLENGELKKAKEMAEKILKMVIEKILKKAKEMAEKILKKVKELGVG-- | |||||||||||||
2 | 1a87A | 0.11 | 0.10 | 3.71 | 0.81 | FFAS-3D | ----VGEITITPDNSKP------------GRYISSNPEYSLLIDAESIKGTEVYTFHTRKGQYVKVTVPDSNIDKMRVDYVNKRFVSQFLLFRKEEKEKNEKEALLKASELVSGMGDKLGEYLGVKYKNVAKEVANDIKNFHGRNIRSYNEAMASLNKVLANPKMKVNKSDKDAIVNAWKQVNAKDMANKIGNKVEKIREKSIEGYNTGNWG-PLLLEVESWIIGG-VVAGVAISLFGAVLSFLPISGLA-- | |||||||||||||
3 | 4nurA | 0.14 | 0.12 | 4.09 | 0.43 | HHpred | ---MAGTASYMYGNLLPPDAGAGLGTTSAGTVTLIPPTGETHVI----DGLTYEFMY-APGEAPAEMLYYIKEK--KALNAAEDSTLAWSKYLNEALKLWGVQWGNEQLSLQRDMYRYINDNKGYTMTEIAEQVKLIATKFSNRGYYGS---------------L---NHNVKATYVLYLGELPPADKAEMMGGADAVLKKAKEYYDKGDFRWVAEVVNHVVFAEPN--NQAAKNMQADALEQLGYQAESG- | |||||||||||||
4 | 4uosA | 0.15 | 0.11 | 3.59 | 0.64 | MUSTER | ------------------------------------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEEKMIKEIKKMLENSEKILKKAKEMAEKILKMVIELAEKILKKAKEMA-ILKKVKELGVDNEEV---KKMLEKMIEEIKKM-LEKAIKKVKEMLEKMIKEIKKMLENGELKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGV | |||||||||||||
5 | 5u1sA | 0.11 | 0.08 | 2.71 | 0.56 | CNFpred | -------------------------------------NINVITIDFCTGNLLLSKLEPR--RKRRTHLRLPL-VHLSFPEATKKLLSIINESNQTTSVEVTNKSWWTTRYDLDKRMQQLLNNIENS---------------WFNGVQ--GFFSPEV----------VDNSLFEKFKDKFYEI------------LHQNLPSRKLYGNP-VEDWVIELFLKLNPQ-EIDFLSKMEDLIYFVLDILLENAYDEI | |||||||||||||
6 | 4g3aA2 | 0.12 | 0.04 | 1.40 | 0.39 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------PPQALIDKLTSCFKHKNAKVREEFLQTIVNALHEYGT--QQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVGDRLRPDL | |||||||||||||
7 | 1a87A | 0.08 | 0.08 | 2.95 | 0.64 | Neff-PPAS | ----------------TPDNSKPGRYISSNPEYSLLAKLIDAESIK---GTEVYTFHTRKGQYVKVTVPDSNIDKMRVDYVVKRFVSQFLLFRKEEKEKNEKEALLKASELVSGMGDKLGEYLGVKYKNVAKEVANDIKNFHGRNIRSYNEAMASLNKVLANPKMKVNKSDKDAIVNAWKQVNKAFKVADLAIKVEKIREKSIEGYNTGNWGPLLLEVESWIIGGV--VAGVAISLFGAVLSFLPISGLAVT | |||||||||||||
8 | 4irtA3 | 0.15 | 0.06 | 2.01 | 0.57 | HHsearch | ------------------------------------CENQTS-SADAGGNPYIAYWREPNSDVPQYRIVWNDG-KWHQRQITDTPFTL-----K-----------------------------GIPIA--------R-PRIVVEGG---EVFYIFRDEERGSRVS-AHAT-------------DVGTSKWTITDLTDF----------S------------------------------------------- | |||||||||||||
9 | 3x17B | 0.15 | 0.13 | 4.27 | 0.64 | SP3 | AFA--------DGQLHLPESGNGVPDILQ------RPDYHKLAGLRWPGMI-------RPEQQRRYVYRITTQDTA--------KAAAAWAMAARIFAPF-DAAFARKALAAAEQAWRFLAASGPILDYPAEDNSGSGHDYIARMARTGL----PAYAPVSW---VNPAALGYFDYVTLGQKGDPAIRARLVQRILEGARSVFQTYEQSGYGVPILAGS--FHWGSNKEALAKGMLLLFAHHLEPRPEYERA | |||||||||||||
10 | 4krxA | 0.11 | 0.11 | 3.83 | 0.89 | PROSPECTOR2 | ENKLPVLDTVVNTLQPDLPPWPATGTIAEQRWNAGAPEMATYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFIL----GNLDTHDRIMRLLASYSPEARFPQAIEEIVAACCYFHQQAEDYQINMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRLGGVWDGLTQQDLQMYEEAY--LSNDADRESPYYCLDDSRLLYQTLAAH---QQPCEFAFLHYSRMMKT----ADEALRDGAQFFTA----QL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |