>PF10160 (254 residues) ECHGFWHNLALIIPSLLFVLFLGFQAKKSFQKLSHGRSYIMISYYGCLWLVSLLNLAWCC LQAWECTPGKEMAWNILSLFTTSGMLFLEVSLVAFLLQGNYASGLEALTRTFVVSGLIVG LDLLLKAIYLFGFGVPLFIDNTEHPHQVKWGLWVVHRLVLTAIYGFILFMYHSKWRERLP ARPAFYKYIAIMFILNALALIACGLTGNGAGFGFWLYSATLVCYHALYLPLLYITFLADF FQEEDLHLENVYYS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | ECHGFWHNLALIIPSLLFVLFLGFQAKKSFQKLSHGRSYIMISYYGCLWLVSLLNLAWCCLQAWECTPGKEMAWNILSLFTTSGMLFLEVSLVAFLLQGNYASGLEALTRTFVVSGLIVGLDLLLKAIYLFGFGVPLFIDNTEHPHQVKWGLWVVHRLVLTAIYGFILFMYHSKWRERLPARPAFYKYIAIMFILNALALIACGLTGNGAGFGFWLYSATLVCYHALYLPLLYITFLADFFQEEDLHLENVYYS | |||||||||||||||||||
1 | 3ayfA2 | 0.11 | 0.10 | 3.59 | 1.12 | SPARKS-K | IELGRIWQIILVVGMLLWLFIVFRGVKRGLKRE-SDKGGLIHLLFYSAIAVPFFYIFAFFIQ----PDTNFTMADFWRWWIIGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHY-YYN-------GSPEVWIALGAVFSALEVIPLTLLILEAYEQKMMRDGGANFPYKATFWFLISTAIWNLVGAGVFGFLINL----PAVSYFEHGQFLTPAHGHAAMMGVYGMFAIAVLLYSLR | |||||||||||||
2 | 5tgzA1 | 0.11 | 0.09 | 3.44 | 1.24 | FFAS-3D | ----LTLGTFTVLENLLVLCVIL-----HSRSLRCRPSYHFIG--SLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLFLA--AIDRYISIPKAVVAFCLMWTIAIVIAVLPLLGWKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILQARMDIELAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKVFAFCSMLCLLNSTVNPIIYALRSKDL-------------- | |||||||||||||
3 | 3rkoB | 0.11 | 0.09 | 3.39 | 1.21 | CNFpred | -----ASMVVLVLADNLLLMYLGWEGVLCSYLLIG-KNGAAAMKAFVVTRVGDVFLAFALFILYNEL--GTLNFREMV-LMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLM------TPEVLHLVGIVGAVTLLLAGFAALVQT-----------DIKRVLAYSTMSQIGYMFLALGVQAW--DAAIFHLMTHAFFKALLFLASGSVILACH------------- | |||||||||||||
4 | 5ee7A1 | 0.13 | 0.13 | 4.37 | 1.02 | Neff-PPAS | --VMYTVGYSLSLAALLLALAILGGL----SKLHCTANAIHANLFLSFVLKASAVLFIDGLLRTVSSDGAVAACRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLRSFFSLYLGIGWGAPALFVVPWAVVKCLFENVQCWTNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARTDYAFRLAKSTLTLIPLLGVHFVVFAFVTDEHRSAKLFFDLALSSFQGLLVAVLYCFLNKEVQSELRRRWHRA--- | |||||||||||||
5 | 3ayfA | 0.12 | 0.12 | 4.14 | 1.01 | SPARKS-K | IELGRIWQIILVVGMLLWLFIVFRGVKRGLKRE-SDKGGLIHLLFYSAIAVPFFYIFAFFIQP---DTNFTMADFWRWWIIEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHYYYNG--------SPEVWIALGAVFSALEVIPLTLLILEAYEQKMMRDGGANFPYKATFWFLISTAIWNLVGAGVFGFLINLPEHGQFLTPAHGHAAMMGVYGMFAIAVLLYSLRNIVKPEAWN | |||||||||||||
6 | 5tjvA1 | 0.10 | 0.09 | 3.46 | 1.20 | FFAS-3D | ----LTLGTFTVLENLL-VLCVILHSR----SLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHSRNVFLFKLGGVTASFTASVGSLFLAAYISIHRPLAYKRIVPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSDIFPHIDETYLMFWIGVTSVLLLFIVYAYMYILSFSDQARMDIRLAKTLVLILVVLIICWGPLLAIMVYDVFGVFAFCSMLCLLNSTVNPIIYALRSKDL-------------- | |||||||||||||
7 | 5sy1A | 0.15 | 0.13 | 4.39 | 0.28 | HHpred | PQIYKYYALFGSLPQIACLAFLSFQYPLLLFKIKKTPEDVFIALYQMLLISGTLHIVRRGVGIILSNDRQEVVVYYLWCVEICYVSAVTLSCLVFNCHRSIRPSRPALVCWMGFTAIQTLVFFICILFAVFLIIIPILWGTNLLFHIGNWPFWLTLVLAALIQH---VASRFLFIRKDLNNRGSLFLLSYILFLVNVMIGVVLGIWRVGLNRNVEAFDPGYRCYSHY--------------------------- | |||||||||||||
8 | 5ee7A1 | 0.13 | 0.13 | 4.35 | 0.89 | MUSTER | SFQVMYTGYSLSLAALLLALAILGGL----SKLHCTANAIHANLFLSFVLKASAVLFIDGLLRTVSTWLSVAACRVAAVFMQYGIVANYCWLLVEGLYL-LLGLRSFFSLYLGIGWGAPALFVVPWAVVKCLFENVQ---TNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRHHTDYAFRLAKSTLTLIPLLGVHFVVFAFVTDEHRSAKLFFDLALSSFQGLLVAVLYCFLNKEVQSE----LRRRWHR | |||||||||||||
9 | 3rkoC | 0.12 | 0.11 | 4.00 | 1.16 | CNFpred | --QGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEM-TRITAATKFFIYTQASGLVMLIAILALVFVHYVWTFNYEEL-EYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA-----SAEFAPIAMWLGVIGIFYGAWMAFAQ-----------TDIKRLIAYTSVSHMGFVLIAIYTGSQ--LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGL | |||||||||||||
10 | 1vt4I3 | 0.18 | 0.08 | 2.70 | 0.48 | HHsearch-2 | --------------------------------------------------------------------------------------------------------EYALHRSIV------DHYNIPKT-FDSDDLIPPYLDQ-YFYSHIHHLKNIEHPERMTLFRMVFLDFRFLEQKIRSTAWN------ASGSILNTLQQLKFYKPYI------C----------DNDP--KYERLVNAILDFLPKIEENLICS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |