>PF10149 (299 residues) MAIYEVYSHPALLRYKTSICTKATLFLIIVLCLTYISPLLVAYRSQGFWTKSSTYEEQPS ITFQYQVLLIAATSTSGDYVAWSTFQNFNNLQGGNLRIPSISAREEDRNQDGKFDQLNLR LALPLRQSEPVYSVQLILTFSYKLFRMSTFIMQSMAYIQHSSSVPGSQLFVSGDLKLQQR QPLKHRGLDTTYNVSVINGNSPFASAYDLTNIIGSYQERNVSTVLSNPSPVWVLGRAAGA PFEINAVIRYPVEIITYQPGFWEMIKFAWVQYVSILLIFLWIFERVKIFVFQNQVLPTV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MAIYEVYSHPALLRYKTSICTKATLFLIIVLCLTYISPLLVAYRSQGFWTKSSTYEEQPSITFQYQVLLIAATSTSGDYVAWSTFQNFNNLQGGNLRIPSISAREEDRNQDGKFDQLNLRLALPLRQSEPVYSVQLILTFSYKLFRMSTFIMQSMAYIQHSSSVPGSQLFVSGDLKLQQRQPLKHRGLDTTYNVSVINGNSPFASAYDLTNIIGSYQERNVSTVLSNPSPVWVLGRAAGAPFEINAVIRYPVEIITYQPGFWEMIKFAWVQYVSILLIFLWIFERVKIFVFQNQVLPTV | |||||||||||||||||||
1 | 4wa0A | 0.15 | 0.12 | 4.15 | 0.83 | SPARKS-K | PLDYAIFSKG---ALNT---------------------------NKNLTVENGSVYSGGDLTIDGGALISINQDSDSRNIIYVKSLKAN---RISPRSTNIDAKTIYVGQEQLYVQLFSDVKLAGPGVNEV-STLASIRGTLEVIDGATVTLKSAVYCNSLVVRNGSRLILENGAKLYLATPLPADSVGSNQLGSTADTSQTPESYINDNEARIEISARLQLHLISRGNITFVGGGLTINGSIISFNINATGNTLKYQPS-----------------------PPIQQDIESNTGIQPS | |||||||||||||
2 | 5tupA | 0.11 | 0.08 | 2.78 | 0.65 | FFAS-3D | -------------MLEARLEQASLLKRVVDAI-------------KDLVQDCNFDCNDSGIALQAMALVSMLLKADRNIALGINLVSLTKVLRAAQNEDILTLKADDSPD-------AVNLMFESAETDRISEYDIKLMDIDETEYAATVEMPSAESVVIEATKEGVKFSCQGDIGSGSVTIRQHTSVDKPEQNVSIALSEPVALTFSLKYLVNFCKSSKVTLCLSQEVP-------------LLVEYGLGSGHLRF------------------------------------------ | |||||||||||||
3 | 1t6bX | 0.15 | 0.10 | 3.28 | 0.40 | HHpred | -----------------------------------------TFASADMWVDDQEVINKNKIRLEYQIKIQYQRENPDFKLYWTDSQNKKEVISDNLQLPELKQ-VPDRDNDGIPDSLEVDFLSPWIKGEKVTG-R----IDKNVSPIVHVDMENIILSKNETISKNTSTS--------RTHTSEVSAGFSSNSTVAIDHSLSLAGERTWAETMGLNTADNANIRYVN------TGTAPIYNVLPTTSLVLGNQTLTIKA---------------------------------------- | |||||||||||||
4 | 4wa0A | 0.12 | 0.11 | 3.91 | 0.67 | MUSTER | PLDYAIFSKGALNTNKNLTVENGSV-----------------YSGGDLTIDGGAVFNIDNLISKGEVINQDSDSRCRDNIIYVEKSLKANRISPRSTNIDAKTIYVGQEQLYGAGSYKFVQLFSDSPGVNEVSTLASIRGTLEVIDGATVTLKSAVYCNSLVVRNGSRLILENGAKLYLATTPDASTIISIQNNGGTISYSSSFSYPSPPAEIDEIRNRDYTSGLLTTPL--PADSVGSNQLGSTADTS-PPQIVIYGESY-INDNEARIEISARLGSPIVDFSTLQLHLISRGTFVGG | |||||||||||||
5 | 1tg7A | 0.09 | 0.07 | 2.65 | 0.91 | CNFpred | ---------------------KYSELKLLGNFAKVSPGYLVANPG--------DLSTSTYTNTADLTVTPLLGSSSASSFFVIRHSDYSSQ-----ASVEYKLTVPTS-----AGNLTIPGSLTLS-----GRDSKIHVTDYDVAGTNILYSTAEVFTWKKFN-NEKVLVLYGGPGEHHEFAVSGAS-----SSSVVEGSSSGISSKKV--------GKALVVAWDVS----------TARRIVQVG-----SLKVFLLDRNSAYNYWVPQVPT-TAPGYSNQETTASSIIVKALVRSA | |||||||||||||
6 | 1wao1 | 0.14 | 0.09 | 2.96 | 0.46 | HHsearch-2 | LNIFELNGLPSETNYIVDRGSFSVEVILTLFGFKLLYPDHFHLLTAQMYELSEVFEWLPLAQCINKVLIMHGGLFSED---GVTLDDIRKIERN-RQPPDSGLWSDPQPQNGRSIENNLDYIIRSH--EVKA-----EGYEVAHGGR------CVTV--FSAPNKASYIHLQGDPQFHQFTAVPHPNVKMAYANTLLQLGM-------M------------------------------------------------------------------------------------------ | |||||||||||||
7 | 4wa0A | 0.10 | 0.09 | 3.46 | 0.94 | Neff-PPAS | -----------------TSVPSSPLDYAIFSKGALNTNKNLTVENGSVYSGGDLTIDGGAVFNIDNLISKGEVINQDVVRNIIYVEKSLKANRISPRSTNIDAKTIYVGQEQLYGAGSYKFVQLFSDSNNEVSTLASIRGTLEVIDGATVTLKSAVYCNSLVVRNGSRLILENGAKLYLATTPDASTIISIQNNGGTISYSSSFSYPSPPAEIDEIRNRDYTSGLLTTPL--PADSVGSNQLGSTADTSQTPPQIVIYGESYINDNEARIEISARLGSPIVDFSTLQLHLISRGNITFV | |||||||||||||
8 | 1t6bX | 0.13 | 0.11 | 3.94 | 0.70 | HHsearch | PMVVTSSNQYFSAIWSGFIKVK------------KSDEYTFATSADTMWVDDQEVINKNKIRLEYQIKIQYQRENPDFKLYWTDSQNKKEVISDNLQLPELKQ-VPDRDNDGIPDSLEVDFLSPWIKGEKVTG-R----IDKNVSPIVHVDMENIILSKNETISKNTST--------SRTHTSEVSAGFSNSSTVAIDHSLSLAGERTWAETMGL--NTADTARLNANIRYVNTGTAPIYNVLPTTSLVLGNQTLERRMTLKEALKIAFGFN-----------EPNGNLQYQGKDITE- | |||||||||||||
9 | 3osqA | 0.05 | 0.05 | 2.24 | 0.66 | SP3 | PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAF-----KYENHLSHNVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQNTPIGDGPVLLPDLSTQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELYKGVSKG--EELFTGVVPILVELDGDVNGHKFSVSGEGEGDAKLTLKFICTTGKLPVPWPTLVTTLVQCFSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEAGAKAGLTFLVDLIKNKHMNADT | |||||||||||||
10 | 1ohfA | 0.05 | 0.05 | 2.43 | 0.93 | PROSPECTOR2 | VISLSIISYPFAVANVDNKEISLDVTNDLIVWLNNLASWRDVVDSGQWFLTPIATTQNAVEGSGFVFNVTRPGIAAGVTLTWASMPPGGSAPSGDPAWTQFQWRHGGFDAPTGVITYTITMQYFDTTTNEWNGFVVTFGQTGGAAGTNATITITAPTVTLTILATTTSAANVINFRN---LDAETTAASNRSEVPLPPLTFGQTAPNNPKIEQTLVKDTLGSYLVHSKMRSFTNPGFDDVNMSTAVCHFSKSCSIVTKLLKNDEILCLADDLAAVLAFAANMLTSVLKSEATTSVIKEL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |