>PF10071 (255 residues) MFLYEVRFECYSDTTISQAEKAINALLDCWRYNGQIIGREFPLVLKEAVFACRVVSPLQD SLLEKYQSNQVKRAKQGLHDVGLLSPKLKLLGRDINSDDSDECHTPKWQVLYTNYLQTCS PLRCGEHFTPIPLHRLPAVANGDHKQLIKWQEDWSACDQLQMNGSILEHGALNEISQINS RLFRRGYDLCKRLEYLTQVPTYYYLYRVGGDNLMSEQTRSCPSCGGDWRLEHSVHDIFDF KCDNCRLVSNLSWDF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MFLYEVRFECYSDTTISQAEKAINALLDCWRYNGQIIGREFPLVLKEAVFACRVVSPLQDSLLEKYQSNQVKRAKQGLHDVGLLSPKLKLLGRDINSDDSDECHTPKWQVLYTNYLQTCSPLRCGEHFTPIPLHRLPAVANGDHKQLIKWQEDWSACDQLQMNGSILEHGALNEISQINSRLFRRGYDLCKRLEYLTQVPTYYYLYRVGGDNLMSEQTRSCPSCGGDWRLEHSVHDIFDFKCDNCRLVSNLSWDF | |||||||||||||||||||
1 | 5cqcA1 | 0.10 | 0.07 | 2.75 | 0.61 | SPARKS-K | -----SIYPPETSWEVNKGSSRLHKLYSLFFDKSSALGDGFQSKKNDQQIFLFVAGYHVDA-KSDAGNDKLDRRLSEISEFCTQPATFILPFVEMPTDI--TKGVQHQVLLTISYKQLTPTVYDSIGRDTILTQSIAAYNTEGNCGSYTFRTIKEVISSSAQGTSQHVQDIESCIKYRNLGV----VDIESALTEGKTLP------------------------------------------------------- | |||||||||||||
2 | 5dn6G | 0.13 | 0.09 | 3.02 | 0.57 | FFAS-3D | --------------AARPYADRMAAVMAGLTAAAAGMAPRLL----AGTGHLLVVMTSERGLAGGFNSSIVKLARLRLQE--LQAVSILTVGKNHVDLSRIGYDNDVATLFYNRFESVISQVPT--ARQVIPAVIEEPDENAILNDLLP-RSVATQVFAALLENAASEQGAMTAMDNATRNAGDMIDRLTTVYNRSRQ--------------------------------------------------------- | |||||||||||||
3 | 3e8oA | 0.06 | 0.02 | 1.01 | 0.34 | HHpred | TVISHGTLSASAE-HAAHLRQLLVHIAQATRQEDGCLL--YLVSEQPGHFLITEHWDNLGA-HTHLALPGVTQAIDALKHLNVTDLKITAYEAGEAINI------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 5i68A | 0.07 | 0.07 | 2.75 | 0.70 | MUSTER | HYCFFSPYRIKPQYEVRGDAEIQKRVFDQWYANGTGPLATN------GIEAGVKIRPTPEELSQ--MDESFQEGYREYFEDKPDKPVMHYSIIAGFFGDHTKIPPGKYMTMFHFLEYPFS-ITSPDPYAA-PDFDPGFMNDER--DMAPMVWAYKKSRETARRMDHFAGEVTSHHPLFPYSSEARALEMDLETSNAYGGPLNLSAGLAHGSWTQPLKKPTAKNEGHVTSNQVELHPDIEYDEEENYIREHTETTW | |||||||||||||
5 | 4hhuA | 0.13 | 0.08 | 2.85 | 0.71 | CNFpred | MGVMVIVFEGD---DLEALEKALKEMIRQARKFA----GTVTYTLSGNRLVIVITGV------PEQVRKELAKEAERLKAEFNINVQYQIMGS-----------GSGVMVIVFEG---------------DDLEALE----KALKEMIRQARKFAGTVTYTLSGNRLVI----VITGVPEQVRKELAKEAERLKAEFNINVQYQIMT------------------------------------------------ | |||||||||||||
6 | 1tuvA | 0.08 | 0.03 | 1.11 | 0.45 | HHsearch-2 | MLTVIAEIRTRPGQHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLE-MNIRILQPG----------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4g59C | 0.08 | 0.07 | 2.69 | 0.63 | Neff-PPAS | -----MDVRIFEDERVDICQDLTATFISYREGPEMFRHSDIFRIEASGEVKHFPWMNVSELAQESAFFVEQERFVYEYIMNVFKAGRPVVFEYRCKFVP--------FECTVLQMMDGNTLTRYTVDKGVETLGSPPYSPDVSEDDIARYGQG----------------SGISILRDNAALLQKRWTSFCRKIVAMDNPRHNEYSLYSNRGNGYVSMRTQVPANGVDIYKYMRMYSGGRLKVEAFVISSPTGWYA | |||||||||||||
8 | 2k5cA | 0.31 | 0.04 | 1.31 | 0.70 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAKCPICGSKWELIIENVEEFVFKCPVCGEEFYGKT-- | |||||||||||||
9 | 5i68A | 0.07 | 0.07 | 2.70 | 0.61 | SP3 | HYCFFSPYRIKPQYEVRGDAEIQKRVFDQWYANG------TGPLATNGIEAGVKIRPTPEELSQ--MDESFQEGYREYFEDKPDKPVMHYSIIAGFFGDHTKIPPGKYMTMFHFLEYPFSRITSPDPYAA-PDFDPGFMNDER--DMAPMVWAYKKSRETARRMDHFAGEVTSHHPLFPYSSEARALEMLETSNAYGGPLN-----LSAGLAHGSWTQPLKKPTAKNEGHVTSNQVELHPD---------IEYDE | |||||||||||||
10 | 5uvgA | 0.10 | 0.10 | 3.58 | 0.87 | PROSPECTOR2 | G--KSFCFRVNNLFNTQARAKEIGQRIRNGAARPQIKIYIDSPHPDEAFDHEVSAFFPANLVFDKRAATKLKEQLHGVGVYGCLYPIMDVAYHCYPNKCNDDALASKGALFLKV------QVGSTPQDQRIVGYILHAPQEDSAIRCGQLDLLQDWLADFRKCSSDDKLEQQHSLFDTNDVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKELLKGNGRREEGLCP--------DWKAEVEEFSFITQLSG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |