>PF09991 (287 residues) AIYAILLLISMYVPILGTVVTFALPLPFILLTLRHRLSNVIVIFVAALLITVIVGQPLSL IKTVMFGLIGVVLGYMYKKEKKPVEILIAGTLAYLIGILLIYVASIKFFNIDLMKQMQNM FSESMAQSEKIVNAAGMPVSKEQKELFAQMSDILQTLFPSILVLVSVCFSWITLILSGSV LRKLKYDVTPWPKFKDIQLPKSIIWYYVICILLATFIKVEPTSYLHMVFSNLNVIFALLL VLQGLTFITFLAHRKGFTKGVPIISFIACMFIPMLFPLVTILGIIDL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | AIYAILLLISMYVPILGTVVTFALPLPFILLTLRHRLSNVIVIFVAALLITVIVGQPLSLIKTVMFGLIGVVLGYMYKKEKKPVEILIAGTLAYLIGILLIYVASIKFFNIDLMKQMQNMFSESMAQSEKIVNAAGMPVSKEQKELFAQMSDILQTLFPSILVLVSVCFSWITLILSGSVLRKLKYDVTPWPKFKDIQLPKSIIWYYVICILLATFIKVEPTSYLHMVFSNLNVIFALLLVLQGLTFITFLAHRKGFTKGVPIISFIACMFIPMLFPLVTILGIIDL | |||||||||||||||||||
1 | 5t77A | 0.11 | 0.11 | 3.91 | 1.13 | SPARKS-K | MFPFFLRKVFGEGA-MSSAFVPLYSSSVINGFSLIILALVILSYFFPELIINLFGAGLITSPSIYFIFLWAISYSILNTNNKFFWPALTPSISNITIIIGTFLSTKYGI-ISPTIGFLIGSILMFFSIIKSIIKHKYFTIKHFPHFLKLFFPTFMTMVVSNTVVDMNVVSQYASRFYLLPYGLFAVSVSTLSKISNLNDALKTTLFFTIPSMVGLIFGAFTSKDTLITSKILIAYTLGLPFYGIYSTISRSYHAIKNTKTPFIAATIVSLSNIILDIIFGLKYGPIG | |||||||||||||
2 | 4k1cA | 0.12 | 0.12 | 4.27 | 1.46 | FFAS-3D | DLQYILKFLLVFVPLGHTLTFLFNFLAIIELADKAGNTIGGLLNATFGNAVELIVSIIALMLGSLLSNLLLVLGLCFIFGNQTAAQTMSSLLAIACASLLIPAAFRATLPFIILELSRGTSIVILIVYVLFLYFQLGSHHALFEQQEEETDEVMSTISRVKSSLVILLGTTVIISFCADFLVGT-----IDNVVESTGLSKTFIGLIVIPIHVTSVLVAMKDKMDLALGVAIGSSLQVALFVTPFMVLVGWMIDVPMTTFETATLFIAVFLSNYLIMSLAMYILI-- | |||||||||||||
3 | 3rkoB | 0.10 | 0.09 | 3.34 | 1.35 | CNFpred | VLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMV-MLMWATLMLLGGAVGKSA------QLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFL-----------PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAW-----------DAAIFHLMTHAFFKALLFLASGSVILAC | |||||||||||||
4 | 3l1lA | 0.09 | 0.09 | 3.45 | 1.09 | Neff-PPAS | YQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIQAVATVLALIPIVGIAVFGWFWFRGETYMAAIQSTLNVTLWSFIGVESASVAAGVVNPKRNVPIATIGGVLIAAVCYVLSTSPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEV | |||||||||||||
5 | 6ftg51 | 0.07 | 0.07 | 2.88 | 1.18 | PROSPECTOR2 | MLMITSAAIYHVLHFLAPLFSSFTTIVTYHLTKEKDAGAGLLAAAMIAVVPGYISRSVAGGIAIFCMLLTYYMWIKAVKTGSIYWAAKCALAYFYLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQIQPVLSSEHMAAFGVFGLCQIHAFVEVLFRSVISLVGFVLLTVGALLMLIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGLAPVMCILSGIGVSQVLSTYMKNLDIEVASGMILVMAFFLITYTFHSTWVTSEAF | |||||||||||||
6 | 5ogeA | 0.09 | 0.08 | 3.01 | 1.09 | SPARKS-K | ------------------------------SVANSGPISILSYCGSSILMTVTNKFVVNFVMLFVQSLVCTITLIILRILSLNKTDAKNWFPISFLLVLMIYTSSKALQYLAVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWYFWMFTNCITSALFVLIMRKRIKLTNFKD-------FDTMFYNNVLALPILLLFSFCVEDWSLTAMIISGVASVGISYCSGWCVRVSMVGALN-------KLPIALSGLIFFDAPRNIFIGFLSGIIY | |||||||||||||
7 | 5t77A | 0.11 | 0.10 | 3.62 | 1.45 | FFAS-3D | -FIFLWAISYSILPALTPSISNITIIIGTFLSTKYGIISPTIGFLIGSILMFFSIIKSIIFPHFLKLFFPTFMTMVVSQINTVVDMNVVSSISYLQYASRFYLLPYGLFAVSVSTVVLSKISNDRKNFNYHLN--------------DALKTTLFFTIPSMVGLIFLSTPIIRFFYTSKILIAY---------------TLGLPFYGIYSTISRSYHAIKNTKTAATIVSLSNIILDIIFGPIGVALYLLFSVKTFPIKDFLKISLNSLIMLFVIFLIQILIGIL-- | |||||||||||||
8 | 4he8G | 0.10 | 0.09 | 3.36 | 1.35 | CNFpred | GVYWAFGLDGLSALFFLTIALTVFLGALVARVE-GRFLGLALLMEGLLLGLFAARDLLVFYVFFEAALIPALLMLYLYGGEGRTRALYTFVLFTLVGSLPMLAAVLGARL-FLLEDLL-AAFWVFLGFALAFAIKTPLLHAWLPPFHQENHPSGLADALGTLYVGVFAFFRFAIPLAPEGFAQA---------------QGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALGVFSGTPEGA-------MGGLYLLAASGVYTGGLFLLAGRLYERTG | |||||||||||||
9 | 4bwzA | 0.10 | 0.10 | 3.63 | 1.06 | Neff-PPAS | EGEILEFLAELGAVFLLFMVGLETRLKDILAVGKEAFLVAVLGVALPFLGGYLYGPALFLGTALVATSVGITARVLQELGVLSRPYSRIILGAAVIDDVLGLIVLACVNGVAAITRLIVLSVVFVGLAVFLSTLIARLPLERLPVGSPLGFALALGVGMAALAASIGLAPIVGAFLGGMLLSEVREKYRELSALASPVVLVAGTVVTVIAILGKVLGGFLGALTQGVRSALTVGCGMAPRGEVGLIVAALGLKAGAVNEEEYAIVLFMVVFTTLFAPFALKPLIAWT | |||||||||||||
10 | 3gi8C | 0.12 | 0.12 | 4.18 | 1.16 | PROSPECTOR2 | AVSMAVGVMLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIITGALSILLWMSYVISIALFAKGFAGYFAPINTFNIAITEGMIFASAIFFLSYMGFGVITNANPKKNVPRAIFISILIVMFVIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFN------MEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLVFYGIIATFKS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |