Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TCRSCGEVHEGIPSFGADAPQPYTALPESEREQRAELSSDQCIIDGKEFYVRGCLEIPVHGQEEPLVWGVWVSVSEQSFQRMSERWDELGREKEPPSFGWLCTHVPLYPDTLLLKTHVRTRPVGQRPFIELEPTNHPLAVDQREG |
1 | 3qd1X1 | 0.11 | 0.10 | 3.45 | 0.72 | SPARKS-K | | -----------------RAVTESAPNVEYHDVKGDMIQSVTTSFDDTSRLLTWTINLTPRQVKS--NLGALVSIS-GNQETRTVTINGKNAANGGVYGAWLYTESV--NNN-VLRITTQVNDTGGEVRLVTSDKKITLPLEFSQV |
2 | 3wtdA | 0.14 | 0.09 | 3.06 | 0.43 | FFAS-3D | | -------------------------------------SPPLCTLPEPPRFVCYCFNLYVTDAAE-----LWSTFTPDSLAALKARFGLEDITEQQAVALTLQED----------RASLTLSGGPSALAFDLSKVPGPEAAPRLRA |
3 | 4whnA | 0.11 | 0.08 | 2.97 | 0.25 | HHpred | | -------------------SPLHRKWPLSLLAINVIESNQYVLL---------------KRDGFPIAFCSWANLNLENEIKYLDDVASDDW-TS-GDRRWFIDWIAPFGDSANELFRIRVDPDSRGKISEFHGGDKKLASKIF-- |
4 | 2vz8B | 0.12 | 0.12 | 4.15 | 0.67 | MUSTER | | VCNCAPAVAATLKEGGFLL--LHTLLSQDQWESLFAGASLHLVALKRSFYGSVLFLCRQQTPQDSPVFLSVEDTSFRWVDSLKDILADASSRVGCSTSGVMVNCLRKEPGGHRIRCVLVSNLSSTSPAPEMHPSSSELQKVLQGD |
5 | 3b59A | 0.14 | 0.08 | 2.61 | 0.71 | CNFpred | | ----------------------------------------SDWLGDFMCFLRCNHRIAILPG-PPCLNHVAYDMLVDDMMRGAHRLKVKG---IDIGWGPGRHTA-------GNNTFSYFVTPG-GFVTEYTS------------ |
6 | 3amtA | 0.12 | 0.10 | 3.66 | 0.38 | HHsearch-2 | | ALAAVGAELEDFTLIAYRYPERFGTYDEEEPVDRIFVTDHLIGENYRSYRLRGRVTLPYDIEGGHVFFEICAAFEPKQFRNVIRLLRKGD---VVEVYGSKKD-------TINLEKIQIVELAEKNPICG---------RRESAG |
7 | 2kl2A | 0.12 | 0.10 | 3.66 | 0.69 | Neff-PPAS | | -------------------GQPNHKVMLDHSHGLAAFRGRGCTVESFPLVIAGIPWLLYLPGKGHCVTGEIYEVDEQMLRFLDDFEDCPSMYQRTALQVQVLEWEGDGDPGDSVQCFVYTTATYAPEWLFLPYHES-YDSEGPHG |
8 | 3j21d | 0.20 | 0.08 | 2.42 | 0.41 | HHsearch | | HCAMCGRPLNGIPRG---RPVEMRKLPKTKKRERP-MP-HLCPRCMRKVMKEQIRAQL------S-------------------------------------------------------------------------------- |
9 | 1mh6A | 0.12 | 0.08 | 2.93 | 0.80 | SP3 | | ----------------TDQATPNLPSRDFDSTAAVFRDAGWMILQRGD----LMLEFFAHPGLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETS--------------SGYPRIHAPELQEWGGT-MAALVDPD---------G |
10 | 3ea0A | 0.10 | 0.10 | 3.60 | 0.49 | PROSPECTOR2 | | AKRVISLPFGDLDYLSGNTHSQSDRLDKSLLDTVQHISPSLDLIPSPADLIHYIIVDFGASIDHVGELCIVTTPSLQSLRRAGQLLKLKEFEKPISRIEIILNRADTNSRIIGRPISKRIPQDEDQSVLKVAP-KSQLSKTALHL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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