>PF09807 (249 residues) FPELNNLLNTSPDRAEQGKLTLLCAAETDGSFLVHHFLSFYLKANCKVCFVALIQSFSHY NIVGQKLGVSLTAARERGQLVFLEGLKSSVDVFFQAQEKTHPLHFLREANAGNLQPLYEF VQEALKPVDSGAAAWRCPVLLVDDLSVLLSLGVGAVAVLDFVHYCRATVCSELKGNLVAL VHDNGDAEDQENDILLNGLSHQSHLVLRAEGLATGFCKDVHGQLRILWRASQPTAQRGRS LTFQYKIQD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | FPELNNLLNTSPDRAEQGKLTLLCAAETDGSFLVHHFLSFYLKANCKVCFVALIQSFSHYNIVGQKLGVSLTAARERGQLVFLEGLKSSVDVFFQAQEKTHPLHFLREANAGNLQPLYEFVQEALKPVDSGAAAWRCPVLLVDDLSVLLSLGVGAVAVLDFVHYCRATVCSELKGNLVALVHDNGDAEDQENDILLNGLSHQSHLVLRAEGLATGFCKDVHGQLRILWRASQPTAQRGRSLTFQYKIQD | |||||||||||||||||||
1 | 3bs4A | 0.13 | 0.11 | 3.93 | 1.49 | SPARKS-K | IEELDREIG----KIKKHSLILIHEEDSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVDT-----FGSFHGIMPGVWYLEGMLSSETLPIKYAKAVEDHKKVWMDLNLFEGREYGFAISMSGYLEV-FTPEETLRYLETSAEVRYGYPRGTNFWLWEGV------KDKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPKV---------RFEYEFKG | |||||||||||||
2 | 4a8jC | 0.13 | 0.12 | 4.02 | 2.08 | FFAS-3D | FSDQAHFFQDS----NSHNLFFITHQCTQPLWINALVETHVLSTRSHAVLASFIHEQNYFTNSLNKLKIPSNN------YNVLDFLSDFIVNNIHNKP-----------RDKILSDVLAKFSAAIQN------NPTDTIVIIEQPELLLSLVSGLTCSELNNKFITPLLR--QCKVLIIVSNSYDASVHSSNLQNFYKSSFIKSINLNLNPLKTA--KDVTGSLHVCRGGAPIATSHVVENEYLYLNEK | |||||||||||||
3 | 4a8jC | 0.12 | 0.10 | 3.44 | 3.07 | HHpred | ---------LPAHDSNSHNLFFITHSCTQPLW-INALVETHVLTRSHAVLASFIHEQNYFTNSLNKLKIPSN------NYNVLDFLSDFIVNNIH---------------NKPRDKILSDVLAKFSAAI--QNNPTDTIVIIEQPELLLSLVLTCSELNNFITPLLRQC-----KVLIIVSNSDIFNHSSNLQNFYKSSFIKSI-NLNLNPLKT--AKDVTGSLHVCRGGAPANSLHVVENEYLYLNEK | |||||||||||||
4 | 3bs4A | 0.14 | 0.12 | 4.14 | 1.67 | MUSTER | IEELDREIG----KIKKHSLILIHEEDSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVDTFGSFHGIMPGVWYLEGML-----SSETLPIKYAKAVEDHKKVWMDNLFEGRELYGFAISMSGYLEV-FTPEETLRYLETSAEVRYGHPRGTNFWLWEGV------KDKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPKV---------RFEYEFKG | |||||||||||||
5 | 4ydsA | 0.14 | 0.12 | 3.98 | 1.44 | CNFpred | NDDLDRRLG----GIPYPASIMIEGDGTGKSVLSAQFVLGFLLSDKKGYVITTEQTTKDYLIKMKEIKIDLIPYFIRGKLRIAPLNTKKF-----------------NWNSSLAEKILDVIVNFIRSK-------NIDFIVIDSLSILAAFS-KEKQLLQFMKDIRVLVNT--GKMILFTIHPDTF-----DEEMKSKITSIVDVYLKLSAATI--GGRRVKILERVKTTGGISG----SDTISFDVDP | |||||||||||||
6 | 3dvlA2 | 0.11 | 0.09 | 3.32 | 0.91 | HHsearch-2 | VVRLDEMCGG---GFFKDSIILATGTGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPES----------------------AGLEDHLQIIKSEIN-------DFKPARIAIDSLSALARG-VSNNAFRQFVIGVTGYA-KQEEITGLFTNTSDQFMG--AHSITDSHII--TDTIILLQYVEIR--GEMSRAINVFKMRGSW----HDKAIREFMISD | |||||||||||||
7 | 3bs4A | 0.13 | 0.12 | 4.03 | 1.79 | Neff-PPAS | IEELDREIG----KIKKHSLILIHEESSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVD-------TFGSFHGIMPGVWYLEGMLSTLPIKYAKAVEDHKKVWMDLNLFEGRLYGFAISMSGYLEVF-TPEETLRYLETSAEVRYGHPRGTNFWLWEGVK------DKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPKV---------RFEYEFKG | |||||||||||||
8 | 3bs4A | 0.14 | 0.12 | 4.12 | 1.28 | HHsearch | IEELDREIGK----IKKHSLILIHEASSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVDTFGSFHGIMP-------GVWYL--EGMLSSETLPIKYAKAVEDHKKLNLFEGRELYFAISMSGYLEVF-TPEETLRYLETSAEVRKKYPRGTNFWLWEGVK------DKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPK---------VRFEYEFK- | |||||||||||||
9 | 3bs4A | 0.14 | 0.12 | 4.14 | 2.02 | PROSPECTOR2 | IEELDREIGK----IKKHSLILIHDASSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVD-------TFGSFHGIMPGVWYLEGMLSSEPIKYAKAVEDHKKVWMDLNLFEGRELYFAISMSGYLEVF-TPEETLRYLETSAEVRYGYPRGTNFWLWEGVK------DKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPKV---------RFEYEFKG | |||||||||||||
10 | 3bs4A | 0.14 | 0.12 | 4.09 | 1.93 | SAM | -EELDREIGK----IKKHSLILIHEASSRGKDILFYILSRKLKSDNLVGMFSISYPLQLIIRILSRFGVDVIKYLENHRLAIVDTFGSFHGI---------GVWYL--EGMLSSETLPIKYAKAVED------HEGRELYFAISMSGYLEVFT-PEETLRYLETSAEVRKKYPRGTNFWLWEGVK------DKRVLLSVYRRADYVLKTRSSLGE--NGIKRELLVIKTPK---------VRFEYEFKG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |