>PF09788 (260 residues) DGERSPLLPAEPGDAGTPGGGGTPQWGPAGAKPAPPQGFPPFPEGHPAVLPGEDPPPYSP LTSPDSGSAPMINCRVCQSLINVEGKMHQHVVKCSVCNEATPIKNAPPGKKYVRCPCNCL LICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPVGVRVICGHCKNTFLWTEFTDRT LARCPHCRKVSSIGRRYPRKRCICCFLLGVIMAATATGLAFGTWKHARRYGGIYASWALV ILLAVVCLGRAMYWACMKVS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | DGERSPLLPAEPGDAGTPGGGGTPQWGPAGAKPAPPQGFPPFPEGHPAVLPGEDPPPYSPLTSPDSGSAPMINCRVCQSLINVEGKMHQHVVKCSVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPVGVRVICGHCKNTFLWTEFTDRTLARCPHCRKVSSIGRRYPRKRCICCFLLGVIMAATATGLAFGTWKHARRYGGIYASWALVILLAVVCLGRAMYWACMKVS | |||||||||||||||||||
1 | 3m1cA | 0.12 | 0.10 | 3.70 | 0.93 | SPARKS-K | LAEVTQLKGLSHNPGRSRAWVTFAAAPDREGLTFPRGDDGATER--HPDGRRNAPPPGPPAGTPRHPTTTWLAAGLLRTP-------GRYVYLSP-SASTWPV--------GVWTTGGLAFGCDAALVRARYGKGFMGLVISMR---------DSPPAEIIVVPADKTLARVGNPTDENAPAVLPGPPAGPEESTNYAQYMSRAYAEFLWRLAGLLASSGFAFVNAAHAHDAIRLSDLLGFLAHSRVLAGLAARGAAGCA | |||||||||||||
2 | 3pmqA1 | 0.12 | 0.08 | 3.01 | 0.56 | FFAS-3D | NQENQAVLLPQGATGAGNSSEWQHFTSETCAASCPGTFVDHKNGHYSYRFSATFNGMNGVTFLSDATQRLVIKCNSCHSNLAFHGGRYNQVETCVTCH--NSKKVSNAADIFPQ------MIHSKHLTGFPQSISNCQTC--HADNPDLADRQNWYRVPTMEACGACHTQINFPAGQGHDNSNCVACHNADWTANVHS-------------------------------------------------------------- | |||||||||||||
3 | 6eznH | 0.14 | 0.09 | 3.03 | 0.34 | HHpred | ----------------------------------------------------TVPTTITVE-DPNEVIQVNFAIE------S-TNKPFQNTLLIGLNLEMAEPEIKDNGSMY-------------------------KYRIDLAKLDAALEARSPEPIKATLILASSTENLFREIL-QLNLNF-DV--DH-SDSDKFGRVAKPIAVIFV-LIIFITILSLIVTWLNSCAAFNIPAVYFLGFIATIFEVIFARYYLGTSI- | |||||||||||||
4 | 6d4hA1 | 0.11 | 0.11 | 3.91 | 0.80 | MUSTER | MYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEHGYMDRPCNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNKVLSFTTTTFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFN | |||||||||||||
5 | 3rkoD | 0.12 | 0.03 | 0.96 | 0.79 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLG | |||||||||||||
6 | 5vo0D | 0.14 | 0.08 | 2.62 | 0.43 | HHsearch-2 | -------------------QGYD-----VEFDPPLE------SKYECPICLMGLRSAVQTP-------CGHRFCDSCIRKSIR-----DTGQKCPVDNEVLLEEQLFPLSLTVKCSCSEKMELRQRFATAPCPQ-CQE-SVPMSHLDEHK---SQHCLQRIMTCPDCAGSFVYAVK-QSHEQFCPFAN------------------------------------------------------------------------ | |||||||||||||
7 | 6e5p2 | 0.08 | 0.06 | 2.30 | 1.01 | Neff-PPAS | --ESGGGLVKAGGSLIGVSNFRISAHTRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSG-----LYSLSSVVTVPSSSLGTQTYICNHKPSNTKVDKKVEPKS----------------------------------------------------------- | |||||||||||||
8 | 5k2mE | 0.15 | 0.03 | 1.03 | 0.53 | HHsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------------VECPVCGSEIEIGEVELHQIVECPVCGAELEVVSL-EPLTLEEL----------------------PEVEE---DWGE--------------------- | |||||||||||||
9 | 2jtnA | 0.15 | 0.10 | 3.25 | 0.74 | SP3 | -----------SSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEGGSGGHMGSGGTPEIPMCAGCDQILKALDRHHSKCLKCSDCHV--PL----AERCFSR---GESVYCKDDFFKRFGTKAACQLGIPPTQVVRRAQDFVYHLHCFA--CVVCKRQLATGDLMEDSRLVCKAD---------YETAKQ---------------------------------------------------------- | |||||||||||||
10 | 4k0mC | 0.05 | 0.03 | 1.67 | 0.98 | PROSPECTOR2 | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------------------------------AAAA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |