>PF09622 (272 residues) DIIRGACGGFLFGIPLLYTMEVWWIGSQTKPQMMMLAIASTFIVVFLLNQTEGFRKRRHS SKISQTATDTIEAIAIGLVCSAFMLFLLQELTPETSLKESLGKIIFESVPFTLGVALTNQ FLGDTRNSNQAEDDNKKPSQINATFADIGATLIGATVIAFNIAPTDEISMLAAAASPPWL LAIIATSLLISYGIVFEAGFSDQQKRRRQRGIFQRPLSETTMSYLVSLLAGTFILWFFHK LSLSDPWTMWLDHTLVLGLPATIGGAAGRLAI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | DIIRGACGGFLFGIPLLYTMEVWWIGSQTKPQMMMLAIASTFIVVFLLNQTEGFRKRRHSSKISQTATDTIEAIAIGLVCSAFMLFLLQELTPETSLKESLGKIIFESVPFTLGVALTNQFLGDTRNSNQAEDDNKKPSQINATFADIGATLIGATVIAFNIAPTDEISMLAAAASPPWLLAIIATSLLISYGIVFEAGFSDQQKRRRQRGIFQRPLSETTMSYLVSLLAGTFILWFFHKLSLSDPWTMWLDHTLVLGLPATIGGAAGRLAI | |||||||||||||||||||
1 | 5y78A | 0.08 | 0.07 | 2.79 | 1.16 | SPARKS-K | TLKVGFYFFLWYFFNFIFNIANKRTLNMWKWVLSTIQLGVGALYCTFLWVLGLRTKPNVSKKLIKALIWPSLGHTLGHAATCMSFSLVA----------ISFTHVVKSAEPVFGAVGSALVLGEFFHPLLTFTW-----------TGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNV----SPVSFSIGNTIKRVIIIFGSILVFRTP | |||||||||||||
2 | 5z1fA | 0.11 | 0.10 | 3.60 | 1.09 | FFAS-3D | -IRQYFIYFFVAVTILFYMIPIAFVSAITRFLPQIALIVFLAMLPKLLLFLSKAEGIPSQSHAIRAASGKY--FYFSVFNVFIGVTLAGTLFNTDMIINLLATSLPKSATFFLTYVALKFFIGCKTEAEVKEAWYPGDLSYATRVPGDMLILTITFCYSV-IAPL--------------ILIFGITYFGLGWLVLNQALKVYVPSYESYGRMWPHIHQRILAALFLFQ---VVMFGYLGAKTFFYTALVIPLIITSLIFGYVCRQKFYGGF- | |||||||||||||
3 | 3rkoB | 0.15 | 0.12 | 4.10 | 1.28 | CNFpred | -------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFY-------DPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMV-MLMWATLMLLGGAVGKSAQLPLQTWLADA-----------AGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALV----------------TDIKRVLAYSTMSQIGYMFLALGVQ-----AWDAAIFHLMTHAFFKALLFLASGSVI | |||||||||||||
4 | 6i1rA | 0.10 | 0.09 | 3.42 | 1.03 | Neff-PPAS | -YLVAALLTILTSSQGILTTLSQSNYDYA-TIPFLAELFKLSVSGFFLWKECRTSPSVRMTKEWRSVRLYVVPSVIYLIHNNVQFATLTYVD-------PSTYQIMGNLKIVTTGILFRLVLKRKLSQVKGCGDSPCDSLFSAPLEGYLLGILSACLSALAGVYTEYLMKKNNDSLYWQNVQLYTFGVIFNMGWLIYGDFKAFELGPWWQRLFNGYSITTWMVVFNLGSTGLLVSWLMKYSD-------NIVKVYSTSMAMLLTMVLSIYLF | |||||||||||||
5 | 4mt1A2 | 0.11 | 0.11 | 4.08 | 1.10 | SPARKS-K | NIRYTLIPTIVVPISLLGGFAFISYMGMSINVLTMFAMILVIGIVVDDAIVVVIMAGEGLPPTKKAMGQISGAVIGITAVLISVFVPLAMFGAAGNIYKQFALTMASSIAFSAFLALTPALCATGFFGWFNKKFDSWTHGYEGMMVVYIGLAVVGVFLFMRLLPTLILYGLAVAASWSIPLAVIPLGLIGAAAGVTGRNLFEGLLSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKLQAQGKSAVEAALEAARLRFRPIIMTSFAFILG | |||||||||||||
6 | 6c08C | 0.10 | 0.10 | 3.51 | 1.06 | FFAS-3D | -IWNTMMGTSILSIPWGIKQAGFTLG-------IIIIVLMGLLTLYCCYRVLVCKYYFGGFGKWSSLVFSLVSLIGAMVVYWVLMSNFLILLSASFFARFTFLGTISVIYLIFLVTYKAIQLGFHLEFHSMFFVPEFRTL--------FPQLSGVLTLAFFIHNC--IITLMKNNKDLSLAYLLVGLTYLYVGVLIFAAFPSPPLSKECIEPNDILVFVARTFLLFQMTTVYPLLGLMGQLHVFVLNVFVVGAGVLMARFRYSGALCGLAL- | |||||||||||||
7 | 3qnqA1 | 0.10 | 0.07 | 2.46 | 0.25 | HHpred | ---------------------------------------------------------VAEQRHLLAIRDGLVL-TMPFLIIGSIFLIISTLPIPKNWNGYPVSATFNIMAFGIAYRLGEYY----K-VD---------------ALASGALSLVTFLLATPFQVAYIDGVIAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTT-FGSIHNVVGKLLQ--EPLILG-------- | |||||||||||||
8 | 6i1rA | 0.11 | 0.10 | 3.70 | 0.93 | MUSTER | WYLVAALLTILTSSQGILTTLS-----NYDYTIPFLAELFKLSVSGFFLWKECRTSPSVRMTKWRSVRLYVVPSVIYLIHNNVQFATLTYVD-------PSTYQIMGNLKIVTTGILFRLVLKRKLS-VKGCGDSPCDSLFSAPLEGYLLGILSACLSALAGV-YTEYLMKKNNDSYWQNVQLYTFGVIFNMGWLIYGDFKGFELGPWWQRLFNGYSITTWMVVFNLGSTGLLVSWLMKYSD-------NIVKVYSTSMAMLLTMVLSIYLF | |||||||||||||
9 | 3rkoC | 0.09 | 0.08 | 3.08 | 1.24 | CNFpred | LAIDGLSLLMVVLTGLLGVLAVLCSWKEIYQGFFHLNLMWILGGVIGVFLAI-------------DMFLFFFFWEMMLVPMYFLIALWGHKASGKTRITAATKFFIYTQASGLVMLIAILALVFVHVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS------------PLFPNASAEFAPIAMWLGVIGIFYGAWMAFA--TDIKRLIAYTSVSHMGFVLIAIYTGSQL | |||||||||||||
10 | 5mg3D | 0.15 | 0.10 | 3.36 | 0.53 | HHsearch-2 | QLSLLLRAG---ALIAPIQIVEERIGPNIEQGLEACLAGLLVSILFMIIFYKKFG--LI----------ATSALIANLILIVGIMSLLP--GATLSMPGIAGIVLTLAVAVDANVLINEEELSNGRTVQ-QAIDEGYRGAFSSIFDANITTLIKVIILYA--VGTGAIKGFAITTGIGVA-TSMFTAIVGTRAIVNLLYGGKRVKK------------------------------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |