>PF09612 (265 residues) STTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVE AIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNL KAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVT SQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYY KRPDLFNLNYLGRGKWFDLFRCFRS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | STTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNLNYLGRGKWFDLFRCFRS | |||||||||||||||||||
1 | 4ayjA | 0.12 | 0.09 | 3.32 | 1.06 | HHsearch | -MRI--GILYICTGK----------YDIFWKDFYLSAERYFDFIIEYYVFTDSPKLYD---EENNKHIHRIKQKNLG-WP-----------------------------------DNTLKRFHIFLRIKEQLERETDYLFFFNANLLFTSPIGK-EILPPSD--SNGL-LGTMHPGFNKTYERRDSTAYPEGRYYYAGGLSGGCTKAYLKLCTTICSWVDRDATNHIIPHDESLINKYFLDNPPA-ITLSP-AYLYPEGWLPFE- | |||||||||||||
2 | 4wlmA | 0.11 | 0.09 | 3.41 | 1.02 | PROSPECTOR2 | PYHLLMMFTKAEHN----------------APLQAKARVALKFEAHLHFVSEEASREVAKALLRELLCKVIFHDVAVLTDKLFPVVEAM-----------------QKYFSAYYSDSIFFLSVAMHQIM---PKEIPRIIQLDLDLKYKTNIRELFEEFDNFLPGAVIGIAREMQPVYRHTFWQFRHENPKTRPGFNSGVMLLNLEAMRQSPPSWVQQLADKYHFRGHLGDQDFFTMIGMEHPELFHVLDHGYSDVFQAYFRCEG | |||||||||||||
3 | 5h60A | 0.12 | 0.10 | 3.60 | 0.83 | SPARKS-K | KTPLLFQWFEFGKNDINTEKNP----------YLNNIIKAATIERLIGIFVDPGQKDAFSKLEYDYNIKVIYIDFSMYYMENISKQESLQLLKKELSDIQEGNDSLIKSYLGWFDFYRNMAMLKAGQLFLEADKVGSGCIYLDADMIIT-------EKLGGIYIPDGIAVHVERIDGR---------------ASMENGIIAVDRNN----HPALLAGLEIMHTKFDADPYSDGVCNGIRKHFNY-----SLNEDYNSFCDFIEF | |||||||||||||
4 | 4wlmA | 0.12 | 0.10 | 3.47 | 0.91 | FFAS-3D | DYHLLMMFTKAEHN----------------APLQAKARVALLAKFELHFVSEEASREVAKALLRELLCKVIFHDVAVLTDKLFPVVEAM-----------------QKYFSAYYSDSIFFLSVAMHQIM---PKEIPRIIQLDLDLKYKTNIRELFEEFDNFLPGAVIGIARFWQFRHENPKTRVGDPPPEGLPGFNSGVMLLNLEAMRQLYSHLPSWVQQLADKRGHLGDQDFFTMIGMEHPELFHVL---DCTW--------- | |||||||||||||
5 | 1vztA | 0.09 | 0.07 | 2.77 | 0.56 | HHpred | -VVTMTKWKAV---VWE------GTYNRA--VL-DNYYAKQKITVGLTVFAVGRYIHYLEEFNKHFPIFYIMVDDVSRM----PLI---ELGPL--RSF----KVFKIKPEKRWQDISMMRMKTIGEHIVAHIQEVDFLFCMDVDQVFQDKFGV--ETLG-----E-S-VAQLQAGWYKTYERRKESAYGEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQDESHLNKYFLLNKPT-KILSPWDYHIG-------- | |||||||||||||
6 | 5h63A | 0.11 | 0.11 | 3.81 | 0.64 | MUSTER | QTPLVFQWFERNPDRFGQNEIPIINTQKN--PYLNNIINAAIIERIIGIFVDKGQRKALGKLEQNYR-NIKVIYNSDLYSMYDKKLTTIYLENITKLEAQSASERDEVLLNGVKKSLEDVLKNNPEETLISSHNKDKGHLWFDF-LKGSDAFLEAGKPGCHHLQPGGCIYLDADLLTDKLGTLYLPDGIKDNHVSLENGIIAVNRSEHPALIKGLEIMHSKPYGDPYND----WLSKGLRHY---FDGSHIQDYDAFCDFIEFKH | |||||||||||||
7 | 1vzuA | 0.10 | 0.08 | 2.78 | 0.95 | CNFpred | KITVGLTVFAVGR-----------YIEHYLEEFLTSANKHFMHPVIFYIMVDDV--SRMPLIELGPLRSFKVFKIKP---------------------------------EKRWQDISMMRMKTIGEHIVAHIHEVDFLFCMDVDQVFQD-------KFGVETLGESVAQLQAWW-FTYERRKESAAYIPEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAHDESHLNKYFLLNKPTKILSPE-------------- | |||||||||||||
8 | 1vztA | 0.08 | 0.07 | 2.80 | 0.72 | HHsearch-2 | EVVTMTKWKPVV---WE--------GTYNRAVL-DNYYAKQKITVGLTVFAVGRYIHYLEEFLKHHVIFYIMVDDVSRM----PLI---ELGPL--RSF----KVFKIKPEKRWQDISMMRMKTIGEHIVAHIHEVDFLFCMDVDQVFQDKFGV--ETLG------ES-VAQLQAGWYATYERRKSAAYPEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAHDESHLNKYFLLNKPTKILSPE--YCWDYHIGLPAD | |||||||||||||
9 | 4wlmA | 0.12 | 0.11 | 3.71 | 0.70 | Neff-PPAS | DYHLLMMFT----------------KAEHNAPLQAKARVALSLRLNLHFVSEEASREVAKALLREFKCKVIFHDVAVLTDKLFPVVEA-----------------MQKYFSAYYSDSIFFLSVAMHQIMPK---EIPRIIQLDLDLKYKTNIRELFEEFDNFLPGAVIGIAREWQFRHENPKTRVGDPPPEGLPGFNSGVMLLNLEAMRQS-PLYSHLLEPSWVQQLADGDQDFFTMIGMEHPELFHVLDCTYSDVFQAYFRCEG | |||||||||||||
10 | 1vztA | 0.09 | 0.08 | 3.00 | 1.02 | HHsearch | EVVTMTKWKPV---VWE--------GTYNRAVLDN-YYAKQKITVGLTVFAVGRYIHYLEEFLTGHPIFYIMVDDVSRM----PLI---ELGPL--RSF----KVFKIKPEKRWQDISMMRMKTIGEHIVAHIHEVDFLFCMDVDQVFQDKFGV--ETLG------ES-VAQLQAGWTYE-RRKESAAYPEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAHDESHLNKYFLLNKPTKILSPECWDYHIGLADIKL- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |