>PF09521 (264 residues) TNILSAFRTIISNYQTNVQHVTNGSNRANNMGDGLEAFIKDAFANTFNETNEQTKLEVFS RIYSYSGNKNNPPDLILQNSDAIEIKKLESASTAIALNSSYPKAKLFSNSTMITTACRTC EAWSEKDMLYAIGNVPKTTNQLKSLWLVYGDCFCADKEVYERIQQTISSGITSIPNVEFT QTNELGKVKKVDPLGITDLRIRGMWHIENPTKIFNYLYHYDETATFQLICLMKKEKYEAL PLEDRNAIENLSNLHVTLSDIRIK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | TNILSAFRTIISNYQTNVQHVTNGSNRANNMGDGLEAFIKDAFANTFNETNEQTKLEVFSRIYSYSGNKNNPPDLILQNSDAIEIKKLESASTAIALNSSYPKAKLFSNSTMITTACRTCEAWSEKDMLYAIGNVPKTTNQLKSLWLVYGDCFCADKEVYERIQQTISSGITSIPNVEFTQTNELGKVKKVDPLGITDLRIRGMWHIENPTKIFNYLYHYDETATFQLICLMKKEKYEALPLEDRNAIENLSNLHVTLSDIRIK | |||||||||||||||||||
1 | 5cqcA1 | 0.16 | 0.12 | 4.17 | 0.72 | SPARKS-K | ---------SIYPPETSW----EVNKGMNS--SRLHKLYSLFFLGDDVSVLLT-------GAYGFQSKKNDQQIFLFRDSDYVAGYHVDAKSDAGWVN-----DKLDRRLSEISEFCSKA----TQPATFILPFVEKGVQHQVLLTISYDTVYDSRTTCDEILTQSIEKAIKS-TDFTLGKFTRAAY-NT---EGNC-----GSYTFRTIKEVISSSAQGTTSN-------------SYLTSQHVQDIESCIYRNLGVVDIESA | |||||||||||||
2 | 3h4rA | 0.11 | 0.08 | 2.74 | 0.51 | FFAS-3D | ---KSQLDDIADTPARKNAPVDTTKTKTLDLGTAFHCRVLELEEFSNRAEEGRKIELMYQSVMALAGHAESSPDKIIPEFHWIDVKTTADIQR----FKTAYYDYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPV------EIFMMGEEAKLAGQQEYHRNLRTL--SDCLNTDEWPAIKTLSP----------RWAKEY------------------------------------------------------- | |||||||||||||
3 | 6qm2A | 0.17 | 0.10 | 3.23 | 0.53 | HHpred | -QIFDKLLDILSANRFFLGDVDIIVKQKDVVGNIIQEWLGGWLRKRE-------------IEFDVSTNTQMPPDFFLNKKDLLEVKAFNSPGFDIADFKMYSDEIIHK-------------PYMLDVDYLIFGYDMDDNVTIKDLWLKK--------------------------------VWQITRSMDGWAINLQ--VKKGVVHKIRPGV---------------------------------------------------- | |||||||||||||
4 | 6nkeA | 0.13 | 0.11 | 3.83 | 0.66 | MUSTER | MTILKQMMRKLKNEKIHMTLIDPAAKSPDESAKIAKEAEMAGTDGGSTDIDERLMDQTVSAIKENTNLK-GSSNMISRHADAIFFMSLLNSSDR---------EFIVGHQVKASKFLSLL-----IEKIPMAYLVFSPGMTVGRVGKANLIDSFDRETALSYSLAAQYMGFKLISGAPRPVSEDISYVKSK--INIP-LIVGG--GIRDPETAMRIAL-----AGADMIVT-------IASNNVYSVLRNIIG---KIKSIEIK | |||||||||||||
5 | 5ks8C | 0.11 | 0.08 | 2.86 | 0.69 | CNFpred | DDMLPICSKLDAVG-----------WSLEAWGGTFDACVRYLR------EDPWERLKKLRKALP-----NSRLQMLLRGQNLLGYRH-------------YSDDVV----RAFVQKSADN----GIDVFRIFDAMNDL-GKHAEGTISYTTSPVHDIPYFVNLAKELESF------------------------GCDTIAIKDMASLLTPQVTGDLVKALRESLPIHLHAHATS--------LASMSIQRAVDNGVAIVDGCIS | |||||||||||||
6 | 6qm2A1 | 0.17 | 0.08 | 2.50 | 0.45 | HHsearch-2 | KLTAQQIFDKLLANRFFLGDVDIIVKQKDVVGNIIQEWLGGWLRKRE-------------IEFDVSTNTQMPPDFFLNKKDLLEVKAFNSPGFDIADFKMY---------------SDEIIPYMLDVDYLIFGYDMDDNVTIKDLWLK-------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6nkeA | 0.11 | 0.10 | 3.66 | 0.68 | Neff-PPAS | MTILKQMMRKLKNEKIHMTLIDPAAKSPDESAKIAKEAEMAGTDGGSTDIDERLMDQTVSAIKENTN-----LKVILFPGSSNMISRHADAIFFMSLLNSSDREFIVGHQVKASKFLSLLGI----EKIPMAYLVFSPGMTVGRVGKANLIDSFDRETALSYSLAAQYMGFKLIGAPRPVSEDTISYVKSK--INIPLIVGGGIRDPETAMRIALAG--------ADMIVTGSIEKSNNVYSVLRNIIGKIKSIEIK------- | |||||||||||||
8 | 6qm2A | 0.15 | 0.11 | 3.83 | 0.83 | HHsearch | QQIFDKLLDILSANRFFLGDVDIIVKQKDVVGNIIQEWLGGWLRKRE-------------IEFDVSTNTQMPPDFFLNKKDLLEVKAFNSPGFDIADFKMYSDEIIHK-------------PYMLDVDYLIFGYDMDDNVTIKDLWLK--------------------------------KVWQITRSMDGWAINLQ--VKKGVVHKIRPGV-WYSINK-KNMPMFDFVSAIEE-TVYQNPATRSLWKRKHYNRSISIPEIAH- | |||||||||||||
9 | 3amjB | 0.10 | 0.09 | 3.46 | 0.74 | SP3 | ARAIAGLREAQTQPGSILGRHVSSVATLQKIRDQLVSFHRTHYVARVGDITRAEAETIAQQLTADLPAGATLPPLPAMPRATVERIANPATQAHIAIKRGDPDFFPGGFESRLMKEIRD-----KRGLSYGAYSYFSPQKS-MGLFQIG--FET-RAEKADEAVQVANDTLDAFLREGPTD-AELQAA-------KDNLINGFALRLDSNAKILGQVAGLPLDYLDHY-----TERVQAV---TVEQVREAFARHVKRENLITV | |||||||||||||
10 | 4ykeA1 | 0.11 | 0.09 | 3.18 | 0.78 | PROSPECTOR2 | TA-----------GPDTVGYEERDPIRKDDSWRTFDEIMQLARTKDVDNKPSRKAMYQVMRSLRKNCLGMKPCELEFLSDPA---EVFEGAFPHVNYYDPDINVSIGDGHLCSLDLLQVAGLV-----NYFGRVPEADNIHVKPILLQKGKTYGMSNVRDERIHRTFRDNKVRFYRPTHYAHTPTGYLDFLDPETGFHVMQPGSSIATSLVPGEA------VPKHIAILSI--------------------TGKSFEVEKIPLR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |