>PF09490 (244 residues) IRNLLIRGMLAGLVAGLVGFGFAKTFGEPSVARAIAFEEQHEHSHDHAQASADATQAAHS HDHGDDEEIVSRDTQSGLGLLTGVAVFGTALGGLFSLVFAFAYGRLGALRARGTSAMLAL FGFVSVAIVPFLKYPPNPPAVGNPETIGPRTTLFFSMIAISIVAAVLAVWLQRRLDKQHG GWNATLMAGAAYVVLIALAQFVLPSIDEVPAGFPASLLWNFRIASVGIQALLWTMLGLVF GALA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | IRNLLIRGMLAGLVAGLVGFGFAKTFGEPSVARAIAFEEQHEHSHDHAQASADATQAAHSHDHGDDEEIVSRDTQSGLGLLTGVAVFGTALGGLFSLVFAFAYGRLGALRARGTSAMLALFGFVSVAIVPFLKYPPNPPAVGNPETIGPRTTLFFSMIAISIVAAVLAVWLQRRLDKQHGGWNATLMAGAAYVVLIALAQFVLPSIDEVPAGFPASLLWNFRIASVGIQALLWTMLGLVFGALA | |||||||||||||||||||
1 | 4zowA | 0.07 | 0.07 | 2.66 | 1.09 | SPARKS-K | TALMANVALIAPLLGPLVGAAWMFVLFAALAAISFFGLQRAETATRILKELGRDYKLVLKNG-------------RFVAGALALGFVSLPLLAWIAQSPIIIITGEQLSEYGLLQVPIFGALIAGNLLLARLT--------SRRT-------VRSLIIMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLLFASDMSKGTVSAAMGMLQMLIFTVGIEISKHAWLNGG | |||||||||||||
2 | 3vvnA2 | 0.11 | 0.09 | 3.28 | 1.06 | FFAS-3D | LKDILRVGLLSQLSMSIAMFFLNSVAITAGGENGVA----------------------------------VFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQVIKGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLG---LRGVWIGIVIGNMVAAIVGFLWGRMRISAL- | |||||||||||||
3 | 5gpjA | 0.13 | 0.11 | 3.68 | 1.21 | CNFpred | VGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGD----------------------------DWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGA---DPRNPAVIADNVGDNVGDI------------------AGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAEIEPALKKQLVISTVLMTIGVAVVSFVALPTSF | |||||||||||||
4 | 1xmeA | 0.16 | 0.14 | 4.63 | 1.04 | SPARKS-K | TLYFLVLGFLALIVGSLFGPFQALNYGN-------------------VDAYPLLKRLLPFVQS----------YYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRGLMWLSWWMAFIGLVVAALPLLALYTFYPPLKGHW----AFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGVFWLMWFLASLGLVLEAVLFLLPWSFGLVEGVDPLVARTLFWWTGHPIVYFWLLPAYAIIYTI | |||||||||||||
5 | 6idpA | 0.10 | 0.09 | 3.14 | 1.05 | FFAS-3D | ----TSTSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQ----------------------------LGVLPLAAQGMPIQMVIIGIQVGLGIATTAVISRAIGAGKTEYALVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDLG--------IDGAAIATIIAFGVGIAIVAPKV---- | |||||||||||||
6 | 4apsA1 | 0.10 | 0.07 | 2.73 | 0.27 | HHpred | ARPAVFWGGVLIMLGHIVLALPF---GASALFGSIILIIIGTGFLKPNV-----STLVGT-LYDEH----DRRRDAGFSIFVFGINLGAFIAPLIVGAAQE-------AAGYHVAFSLAAIGMFIGLLVYYFKTLDPHYLDPLAPEEVKPLLVKVSLAV-AGFIAIIVVMNLVGW-NSL-PAYINLLTIV-AIAIPVFYFAWM----------------------------------------- | |||||||||||||
7 | 6ei3A | 0.10 | 0.09 | 3.53 | 0.90 | MUSTER | FGAVVRSALLPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDAAVDRALLRVLVIFALVTPFFSLFDQKASTWVLQGRE-MRMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDGG--EPMHIAWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVR | |||||||||||||
8 | 4he8F | 0.10 | 0.09 | 3.17 | 1.19 | CNFpred | FNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYKN-------------------------PQYADSARKAFIVNRIGDLGFMLGMAILWTLSISELKEAME-LKNPDLLALAGLLLFLGAVGKSAQILMVWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSFLYSVLP----DVSYAIAVVGLLTAAYGALSAFGQTD--------IKKIVAYSTISQLGYMFLAAGVGAYWVALF | |||||||||||||
9 | 2l35A | 0.21 | 0.05 | 1.69 | 0.55 | HHsearch-2 | ------------------------------------------------------------------------CSTVSPGVLAGIVVGDLVLTVLILAVYFLGRL-GTAEVLGIISIVLVATVLKTIVLIPFLEQN------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6h7dA2 | 0.12 | 0.11 | 3.95 | 0.94 | Neff-PPAS | WKNIMESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFGTSGTGTLTPATADWILAFICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMK-FGLFYFFASMVAIMTVFIYFLLPETKGVPIE---------EMGRVWKQHWFWKKYIPEDAIIG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |