>PF09243 (271 residues) AAKAYLAARLPATYAAVRASLDSAAESCPEFAPQSMLDVGAGPGTALWAAKQCWPELQSA TMIEASPAIRAVGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTIAYVLDELAPDERE KLIERLWASARQMFVIVEPGTPAGWRRILDARKALIARGAYIAAPCPHGLDCPLVAPDWC HFSQRVARSRIHRMTKDAEVPWEDEKFVYLAAVREKPAGVAARVIAPPRVGGGKVSIKLC KQDGQAEERLTTKRDGEFFRRARRADWGDAF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | AAKAYLAARLPATYAAVRASLDSAAESCPEFAPQSMLDVGAGPGTALWAAKQCWPELQSATMIEASPAIRAVGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTIAYVLDELAPDEREKLIERLWASARQMFVIVEPGTPAGWRRILDARKALIARGAYIAAPCPHGLDCPLVAPDWCHFSQRVARSRIHRMTKDAEVPWEDEKFVYLAAVREKPAGVAARVIAPPRVGGGKVSIKLCKQDGQAEERLTTKRDGEFFRRARRADWGDAF | |||||||||||||||||||
1 | 4gekA | 0.15 | 0.12 | 3.96 | 1.07 | SPARKS-K | VFPDMIQRSVPGYSNIISMIGMLAERFVQ--PGTQVYDLGCSLGAATLSVRRNIHDNCKIIAIDNSPAMIERCRRHIDAYKAPPVDVIEGDIRDIAIEN--ASMVVLNFTLQFLEPSERQALLDKIYQGLGGALVLSEKFSFVGELLFNMHHDFKRANGYSEL-------EISQKRSMLENVMLTDSVETHKARLHKAGFEFQCFNFGSLVALKAEDAA---------------------------------------------------- | |||||||||||||
2 | 3dtnA | 0.13 | 0.09 | 3.22 | 1.42 | FFAS-3D | -SGKYQRRKFIPCFDDFYGVSVSIASVDT--ENPDILDLGAGTGLLSAFLMEKYPEA-TFTLVDMSEKMLEIAKNRFRGNLK---VKYIEADYSKYDFEEKYDMVVSALSIHHLEDEDKKELYKRSYSKESGIFINADGETAFIENLNKTIWRQYVENS-----------GLTEEEIAAGYLDKDIEMNQQLNWLKEAGFRYKYYQFAVMFGRKT-------------------------------------------------------- | |||||||||||||
3 | 5dnkA | 0.11 | 0.10 | 3.73 | 1.50 | HHpred | ------AITNPYHLSTL----ATLFGINPEVENSKILELGCAAGGNLIPHAVLYPN-AHFVGVDLSKVQIDEANKNVRALGLKNIEFHHCSITDIDDSFGKFDYIICHGVISWVPKIVRDKIFKVCNRNLTNGIAYISYNTLPGWNMVRTIRDMMLYHSSEFVKDLSKTPYAEVLENAQFYFHEFMNPPKVVEQLKAVNMDFTNRRFRTTLLCHNDLKINNDNIIFNVIPEKTENLQFFLNGNKE-SNLSTTSPMKAILYTFSE-NLN--- | |||||||||||||
4 | 5w7kA | 0.12 | 0.11 | 3.91 | 1.21 | MUSTER | GLETYMIAE-KITRYFTRDLIELSGLLESELSPLKLLDLACGTGVVSERLHEMLASKAELICGDISAELTGHVKRKIIEEGWTNSSARVMDAQNTELATAELTHVFAALAWTSFPD--TYAALKDSLRILGGTLTISTWQKTEWLGVLEAAVKTI---PTRLPFP-TTKEFMSCMNPGW------DDENYVRGRLEEA--GFVHVYSTTISKEFQISTADLYKIAAPVI---PIIVSKWWTTE---QKEAHEHEILPALAKHLEATYGETG | |||||||||||||
5 | 4pneA | 0.18 | 0.13 | 4.21 | 1.19 | CNFpred | --------------QAADRLTDLVAERTVLDGGVRLLDVGCGTGQPALRVARDN--AIQITGITVSQVQVAIAADCARERGLHRVDFSCVDAMSLPYPDNAFDAAWAMQSLLEMS--EPDRAIREILRVLKGILGVTEVVKR-RICLAEQLLESLRAAGFEILDWEDVSSRTRYFMPQFAEELAAH-GPAVAGWAAAVC--AHDMGYAILTARKPVG------------------------------------------------------ | |||||||||||||
6 | 5w7kA | 0.11 | 0.10 | 3.44 | 0.37 | HHsearch-2 | ILETYMIAEKI--T---RYFTRDLIELSGLLSPLKLLDLACGTGVVSERLHEMLASSWELICGDISAELTGHVKRKIIEEGWTNSSARVMDAQNTELATAELTHVFAALAWTSFPDTY--AALKDSLRILGGTLTISTWQKTEWLGVL---EAAVKTIPTR--LPFPTT---KEFMSCMNP--GWDDENYVRGRLEE--AGFVHVYSTTISKEFQISTADLYKIATKHLGETGLVPQKW-----TAVFAKGEKEK---------------- | |||||||||||||
7 | 5egpA | 0.09 | 0.08 | 3.23 | 1.28 | Neff-PPAS | SFVDRYKYTEKLTGLYAQTLVDYSGVANTSQKPLVVLDNACGIGAVSSVLNHTLQDTWKLTCGDLSEGMLETTKRRLQDEGWVNAETKIVNALDTGLPDGHYTHVFVAFGFQSFPDANAALKECFRILASGGILASSTWQNFNWIPIMKAAIETIPGN-----LPFPTQKEFITLHNAGW-----DSESYIQSELEKL--GFRDVKVIPVPKETSIPIDEFFEVCMMIIPYLLPKFW-----TEEQRESHEKDVPMVLRQYLQDTYGANGQ | |||||||||||||
8 | 3mggA | 0.12 | 0.09 | 3.11 | 0.60 | HHsearch | -----------------ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPD-AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPE--EALKSLKKVLGGTITVIEGDGKKAWNCLRQIYPLLQESGFEKIRVEPRVYIDPELVDGFILIIQIIKEEEWEKGIEKTAEHGGTFCYTFFGWGTK-------------------------------------------------------- | |||||||||||||
9 | 5w7kA | 0.12 | 0.11 | 3.76 | 1.51 | PROSPECTOR2 | GILETYMIAEKITRYFTRDLIELSGLLESELSPLKLLDLACGTGVVSERLHEMLASKAELICGDISAELTGHVKRKIIEEGWTNSSARVMDAQNTELATAELTHVFAALAWTSFPDTYA--ALKDSLRILGGTLTISTWQKTEWLGVLEAAVKTIPTRLP----FPTTKEFMSCMNPGW------DDENYVRGRLEEA--GFVHVYSTTISKEFQISTADLYKIAAATYGETGLVPQKW-----TAVFAKGEKEK---------------- | |||||||||||||
10 | 5egpA | 0.09 | 0.06 | 2.38 | 1.72 | SAM | -VDRYKYTE-----KLTGLYAQTLVDYSGVQKPLVVLDNACGIGAVSSVLNHTLQDTWKLTCGDLSEGMLETTKRRLQDEGWVNAETKIVNALDTGLPDGHYTHVFVAFGFQSFPDAN--AALKECFRILGGILASSTWQNFNWIPIMKAAIETIPGNLPFPT------------QKEFITLHGWDSESYIQSELEK--LGFRDVKV---------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |