>PF07923 (294 residues) AYDFEYSDMGPHPEEIDEWFVYQFWQWVRLNSAQRAFEWHWQHEFNAQNAWDDADNDTRT RFIQAAIAGVQSNDAALRSASIGKLVYLVLGRWGDTAMTNATSGDNKSVASISQLQAIKA GVECLTSLEGLPVIWETLRNSFELHWSGDPQGQHGNLQEAQDELMNLMTIMYIAIQETLN DPEDMSSTYGKLLELNPSLVDYMLTATSKLRWDEQNLMPHTQIFLLFWKSILLVFGGSQE LAAVKKATSETANDGKDRETITASPLDYHVFRQEITSKYPAYVPPQPLIPLEAE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | AYDFEYSDMGPHPEEIDEWFVYQFWQWVRLNSAQRAFEWHWQHEFNAQNAWDDADNDTRTRFIQAAIAGVQSNDAALRSASIGKLVYLVLGRWGDTAMTNATSGDNKSVASISQLQAIKAGVECLTSLEGLPVIWETLRNSFELHWSGDPQGQHGNLQEAQDELMNLMTIMYIAIQETLNDPEDMSSTYGKLLELNPSLVDYMLTATSKLRWDEQNLMPHTQIFLLFWKSILLVFGGSQELAAVKKATSETANDGKDRETITASPLDYHVFRQEITSKYPAYVPPQPLIPLEAE | |||||||||||||||||||
1 | 3qmlC | 0.11 | 0.09 | 3.30 | 1.08 | FFAS-3D | -YEFS-SDFKEMRNIIDSNPTLSSQDIARLEDSFDRIMEFAH------------DYKHGYKIITHEFALLENLPLTLRELSTRVI--------TSCLRNNPPVVEFINESFPNFKSKIMAALSNLNDSRSSNILIKRYLSILNEL--PVTSEDLYSTVVLQNVYQLQIKVLELISKILKADMYELQEWANEFQEIDELHTRTFFDTLYNLKKIFKSDITINKGFL---NWL------AQQCKARQSNLDNGLQERD---------TEQDSFDKKLIDRHLIF------------ | |||||||||||||
2 | 4r0zA3 | 0.10 | 0.05 | 1.77 | 1.07 | SP3 | -----------------------------------------------------TNEENLTQLIIKLLEIIRVANDGMTACACGTLSNLTCNN--------------------------TRNKQTVCSHGGIDALVTAIRRL------------PEVEEVTEPALCALRHCT--------ARHSLAEEAQSELRFCQ--AFPVILDQLET---LRTP---VIKAALGVIRNSALL-------QTNLIELTQEQTANGH------------------------------------- | |||||||||||||
3 | 5k7vA | 0.11 | 0.09 | 3.30 | 0.77 | SPARKS-K | -----------------IEEVVAEMIDILAESSKKSIEELARAADNKTT------EKAVAEAIEEIARLATAASEEFMARAISAIAELAKKAIEAIYRLADNHTTDTFMAIAAIANLAVTAILAIAALAAISAIAELAKKAIEAIYRLADNHTTDFMAAAIEAIALLATLAILAIALLASNHTTE-EFMAKAISAIAELAKKAIEAIYRLADNSPTYIAIEAIEKIARKAIKAIEMYKEKAKSAIDEIREKAKEAIKRLEDNRT------------------------------ | |||||||||||||
4 | 3dadA2 | 0.06 | 0.04 | 1.77 | 1.02 | FFAS-3D | ------------------------------PELRRSLFS-LKQIFQEDKDLVP--EFVHSEGLSCLIRVGAAADHNYQSYILRALGQL--------------------MLFVDGMLGVVAHSDTI------QWLYTLCAS------------------LSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGA--PPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDMEALVQRHLGTAGTDVDLR---TQLVLYENALKLE---------------- | |||||||||||||
5 | 4gmnA | 0.10 | 0.07 | 2.50 | 0.40 | HHpred | -----------ILPVLKDLKSPDAKSR--TTAAG-AI----ANIVQD-AK--CRKLLLREQVVHIVLETLTDNNIDSRAAGWEILKVLAQEEAD--------------------------FCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDE----IHEAV--ATKQILRLLFRLISAD---I---APQDIYEEAISCLTTLSEDNLKVGQAITDDLATGTDP---------------------------------------- | |||||||||||||
6 | 5ugqA | 0.11 | 0.10 | 3.60 | 0.75 | MUSTER | PAIWCNSDADNDRLRAEPQVDYSREGVAHIENETKQFVGRCVDKG--KNFLAHVGTVNVAKDLDAIRAALGDDKL---YGTRIGSAYAEE---DGAVDPNADPIEAELRQAKGFQDAFNNYAADCAKNAGCPKAVEVYHSLVDPLVDPDNPRISRPARTKDPRGLSYSDAIVGTIAL--YSPNLWQHLTDGLSELVDNRGDTLLALADYRRDSHGRYNNSGDARVAINCVDQPPVTDRDKVIDEDRRAREIAPFSYGKFTGDAPLGTCAFW---------PVPPTSQPHAVSAP | |||||||||||||
7 | 4c0pA | 0.08 | 0.06 | 2.40 | 0.84 | CNFpred | -----------IVERCCRCLRFAVRCV-LLQPLVTQMVNVYHVHQ-----------SCFLYLGSILVDEYG-GCRQGLLDMLQALCIPTFQLLEQQNGLQN-----HPDTVDDLFRLATRFIVTLLRSQVVIPILQWAIASTTLD--------------HRDANCSVMRFLRDLIHTGVANDEDFELRKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVD------RPTFCRWLENSL---------TVTHKQLTDFHKQVTSA---------------- | |||||||||||||
8 | 1vt4I | 0.15 | 0.14 | 4.61 | 0.72 | HHsearch-2 | DVQDMPKSILSK-EEIDHIIMSKVSGTLRLFWVQKFVEEVLRINYQQPSMMTRMYIEQRDRLYRQALLELRPNSPETVLEMLQKLLYQIDPNWTSRSDH--------SSNIKLRIHSIQAELRRLLKSKPNAKAWNAFNLSCKILLTTRFSLDHHSMTLTPDEVKS----LLLKYLDCRPQDLPRESIRDNWKHVNCDKLTTIIESSKMFRLSPSAHIPT---ILL----SLIWFDVIKSDVMVVVNKLHKYSLEKQPKESTIIPSIYLELKVKLENEYATFDSDDLIPPYLDQ | |||||||||||||
9 | 1qgkA3 | 0.10 | 0.09 | 3.25 | 0.92 | Neff-PPAS | ---------DVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLG-------GEFLKYMEAFKPFLGIGLKNAEYQVCLAAVGLVGDLCRALQSNIIPFCDENENVHRSVKPQILSVFGDIALAIGGEKYLEVVLNTLQQASQAQVDKSD---YDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQP----RVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKVEARPMIHELLTEGRR-SKTNKAKTLARWATKELRKLKNQA---------------- | |||||||||||||
10 | 4gmnA1 | 0.11 | 0.05 | 1.82 | 0.58 | HHsearch | ---------DK-ILPVLKDLKSDAKSR--TTAAG-A----IANIVQ-DAKCR--KLLLREQVVHIVLETLTDNNIDSRAAGWEILKVLAQEEAD--------------------------FCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDSLLVLIGLLALA--------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |