>PF07891 (251 residues) SDLEMVYVGQMCLSWEILHWQYDKALEIWDSDPYGIRRYSEVADEFQQFQVLMQRFIENE PFEGPRLQNYVKNRCVLRNLLQVPVIREDSIKDRRARRKEKDDDDAITSDKLVEIMEESI RIFWRFVRADKDAHNVVLKGRKGTQIEPQDPIELELLTEVRTNLQKKEKKLKDILRSGNC ILKKFQKRNQEESSSDQVLYFFSQVDMKLVSRVLNMSKITTDQLLWCRNKLNKINFVTGK IHVEPSFLLFP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | SDLEMVYVGQMCLSWEILHWQYDKALEIWDSDPYGIRRYSEVADEFQQFQVLMQRFIENEPFEGPRLQNYVKNRCVLRNLLQVPVIREDSIKDRRARRKEKDDDDAITSDKLVEIMEESIRIFWRFVRADKDAHNVVLKGRKGTQIEPQDPIELELLTEVRTNLQKKEKKLKDILRSGNCILKKFQKRNQEESSSDQVLYFFSQVDMKLVSRVLNMSKITTDQLLWCRNKLNKINFVTGKIHVEPSFLLFP | |||||||||||||||||||
1 | 4uosA | 0.18 | 0.12 | 4.04 | 0.80 | SPARKS-K | ------------------------------------------------------------GDNEEVKKMLEKMIEEIKKMLKVKEMLEKMIKEIKKMLENGEDSEKILKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEN---GEDSEKILKKAKEMAEKILKMVIELEKILKKAKEMAEKILKKVKELGVG----------- | |||||||||||||
2 | 3qc1A | 0.10 | 0.07 | 2.52 | 0.89 | FFAS-3D | ---------------ELFETSKKLLEDVEVATEPTGSRVSKGLELLEKAAGMLSQFSRNEDLEASTDLKYLMVPALQGALTM----------------------KQVNPSKRLDHLQRAREHFVHFLT------------QCHCYHAYPNLVAMASQRQAKIERYKQKKEVEHRLSA---LKSAVESGQADD--ERVREYHLLHLRRWIAVSL--------EELESIDQEIKILK---------------- | |||||||||||||
3 | 1vt4I | 0.18 | 0.15 | 4.80 | 0.36 | HHpred | EEIDHIIMSTLRLFWTLLSKQEEMVQKFVEEVL--RINYKFLMKTEQRQPSMMRLYNDNQVFNVSRLQPYLKLRQALLELRPAKNVLIDGVL---------------GSGKTWVALDVCLSYKVQ-CKMDFKIFWLNLKNC----NSP--ETVLEM--------LQKLLYQ----IDPNWTSR-----S---DHSSNIKLRIHSIQAELRRLLKSKPYENNVQKAWNAFNLSCKRFTTTHISLDHHSMLT- | |||||||||||||
4 | 4tqlA | 0.14 | 0.12 | 4.10 | 0.80 | MUSTER | ---YKQMVQELEKARDRMEKLYKEMVELIQK------AIELMRKIFQEVKQEVEKAIEE-------KKLYDEAKKKIEQMIQ--QIKQGGDKQKMEELLKRAKE---EMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKE-KMEKLLKEMKQRMEEVKKKM-ELLEKIKKNIDDLKKIAED-KKAEENIKEAKKIAEQLVKRAKQLKQVAEELIKKILQLIEKAKEIAEKVLKG------- | |||||||||||||
5 | 5cwiA | 0.08 | 0.06 | 2.34 | 0.75 | CNFpred | -------ARDAQKLASQAEEAVKLACELAQEHPNAAKLCIKAASEAAEAASKAAELAQRHPDSRDAIKLASQAAEAVKLACELAQEH------------------ADIAKLCIKAASEAAEAASKAAELAQRH---------------PDSQAARDAIKLASQAAEAVKLACELAQEHADIAKKC-----------IKAASEAAEEASKAAEEAQRH-KARDEIKEASQKAEEVK---------------- | |||||||||||||
6 | 1vt4I | 0.16 | 0.15 | 5.02 | 0.64 | HHsearch-2 | EEIDHIIMSTLRLFWTLLSKQEEMVQKFVEEVL--RINYKFLIKTEQRQPSMMRLYNDNQVFNVSRLQPYLKLRQALLELRPAKNVLIDGVLCKMDKIFWLNLKNCNSPETVLEMLQ---KLLYQ---IDPNWT----------SRSDHSSNIKLRIHSIQAELRRLLAKAWNAFNLSCKILLTTRFKQVMTLTPDEVKLLLKYLDCRIILNVLPPSATILLSLIWFDVIKSDVMVVVNKLHKEKSTISIP | |||||||||||||
7 | 4tqlA | 0.13 | 0.12 | 4.13 | 0.91 | Neff-PPAS | ---YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG--------------------- | |||||||||||||
8 | 1vt4I3 | 0.14 | 0.10 | 3.27 | 0.63 | HHsearch | --------------EYALHRSIVDHYKTFDSDDLIPYLD-------QYFYSHIGHHLKNIE----HPERMTLFRMVFL---------DFRFLEQKIRHDS-TAWNASG--SILNT-----LQQLKFYKPYICD---------------NDPKYERL---VNAILDF----LPKIEENLICSKTDLLRIAL-MAEDE--AIFE-----EAHKQVQRGGGGGGGGGG------GGGGGGGGGGGGGGGGGGG- | |||||||||||||
9 | 4uosA | 0.18 | 0.13 | 4.17 | 0.81 | SP3 | -------------------------------------------GDNEEVKKMLEKMIE------EIKKMLEKAIKKVKEML------EKMIKEIKKMLENGEDSEKIAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEKMLEKMIEEIKKMLEKAIKKVKEMLEK---MIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAKILKKAKEMAEKILKKVKELGVG----------- | |||||||||||||
10 | 4uosA | 0.17 | 0.13 | 4.19 | 0.82 | PROSPECTOR2 | GDNE-----EVKKMLEKMIEEIKKMLEKA---------IKKVKEMLEKMIKEIKKMLENGE---DSEKILKKAKEMAEKILK---------MVIEL------------AEKILKKAKEMAEKILKKVKELGVDNEEVKK------------MLEKMIEEIKKMLEKAIKKVKEMLEK---MIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILK------KVKELGV----G | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |