>PF07602 (264 residues) ISGNDVTNTGTQSAPFRSITKAILVAKAKNISIIAVAPGTYDASIGETFPIVIPEEVNLY GDFNGKGLIGGSSSLYAGPPGTTPKTGITLISGNGPDVSGHNNVTLKLNNSSQVAGFKIT NPKPFDNKVYSTTVLLYNTNSAKVKSNTIEGIFGGHGINVSTYNSPDSGGNIISGNSILS NYNGIADSTMSASKVNKVEKNIIIQNNIGVKSNYVKLDLGQGSTGSVGENTFSCNHHQDI YVGTAASGQTQYALNNAWDHMPPT |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | ISGNDVTNTGTQSAPFRSITKAILVAKAKNISIIAVAPGTYDASIGETFPIVIPEEVNLYGDFNGKGLIGGSSSLYAGPPGTTPKTGITLISGNGPDVSGHNNVTLKLNNSSQVAGFKITNPKPFDNKVYSTTVLLYNTNSAKVKSNTIEGIFGGHGINVSTYNSPDSGGNIISGNSILSNYNGIADSTMSASKVNKVEKNIIIQNNIGVKSNYVKLDLGQGSTGSVGENTFSCNHHQDIYVGTAASGQTQYALNNAWDHMPPT | |||||||||||||||||||
1 | 6c72A3 | 0.09 | 0.08 | 3.19 | 1.74 | SPARKS-K | QAGLRAELLESDLIQTTILQKCVDYMALIGGGVVQLPKGHIYAK------AMAKSNVEVRGTDSFVSVGSEADINNLRTVVQTATYKHGTFWHSSDGS----QVYLVPENGAGVSNLKMLGSRLGSTSSNCGFGIKIIGDSFTAKWVDTSGFRL-EGLYIRGKDGVSCSNHYFENCNFLDARNTA---ALVYCHDVTFKNCTFQQWVYLFDIEPNPATTDTVYNVTLINCVFNALAAEPTVLVKEQGSPNVKFLNCRFKGKAT- | |||||||||||||
2 | 5olqA | 0.12 | 0.11 | 4.01 | 1.43 | FFAS-3D | -EGSD-SNPGTSDKPFATLVKVQEVVVA--GDVVYINPGTYVVPANQVPMTTTNSGFHMNKSGEAGKPI--------SYLANPNKQGRPIFDLSQVKPKDQRITVFYTGSNLYLKGFDVIGTQVTITGHTQSGFYLLGGSNNHILNCDAYNNNCFEAVKIINAIPSVIPQHEVRNSLAYYNRLGFYA--NHHLGGIIFESNTAVNSGENYNMLALPPTDVNGYDHMVKNNLSLVTRSGSKHIVMVNRAKS-EVSNNSFDGSEEV | |||||||||||||
3 | 5olqA | 0.15 | 0.13 | 4.36 | 1.93 | HHpred | PEGSDS-NPGTSDKPFATLVKVQEV--VVAGDVVYINPGTYVVPANQVPVFHMKSGISYLANPNK--------------------QGRPIFDLSQVKPKDQRTVFYVTGSNLYLKGFDVIGTQVTITGHTQSECFRIVANNNKFEDLRTHDG-MAIGFYLLGGSNSNGTGNVFEGCRAWYNDDGFDLIN--CFEAVKIINCWSFLNGTGFKAGGYGMAADVIPQHEVRNSLAYYNRLRGFYANHHL--GGIIFESNTAVNSG-- | |||||||||||||
4 | 2pyhB | 0.16 | 0.15 | 4.90 | 1.56 | MUSTER | ALGDGVS------DDRASIQAAIDAAYAAGGGTVYLPAGEYRVSAAGDGCLMLKDGVYLAGAGMGEKLIDGSDQKITGMVRSAYGEETLTLDGNRDNTSGKVDGWFNGYIDVTIERVEVREMSGYGF------DPHEQTINLTIRDSVAHDN-GLDGFVADYLV-----DSVFENNVAYANRHGFNVVT--STHDFVMTNNVAYGNGSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMT---SDITLQNADIHGNGSS | |||||||||||||
5 | 5lw3A | 0.14 | 0.12 | 4.04 | 3.60 | CNFpred | ---------------RVAIQAAIDAAHAAGGGTVYLPPGEYRVSAPSDGCLTLRDNVYLAGAGMGQTVIKL-ITGIVRSPTSNFGMRDLTLDGNRANTVDKVDGWFNGDRNVTIERVEVREMS--------GYGFDPHTINLVLRDSVAHHNG-LDGFVADYQ-----IGGTFENNVAYANRHGFNIVTS--TNDFVMRNNVAYGNGNGLVVQRGSENLAHPENILIDGGSYYDNGLEGVLVKMS---NNVTVQNADIHGNGSS | |||||||||||||
6 | 5olqA | 0.15 | 0.13 | 4.35 | 0.95 | HHsearch-2 | PEGSDS-NPGTSDKPFATLVKVQEV--VVAGDVVYINPGTYVVPANQVCVFHMNKPISYLANPNKQGR--------------------PIFDLSQVKPKDRITVFYVTGSNLYLKGFDVIGTQVTITGHTQSECFRIVANNNKFEDLRTHDG-MAIGFYLLGGSN-----NHILNCDAYNNYDGFDLIN--CFEAVKIINCWSFLNGTGFKAGGYGMAASVIPQHEVRNSLAYYNRLRGFYANHHL--GGIIFESNTAVNSRSG | |||||||||||||
7 | 5gkdA2 | 0.12 | 0.12 | 4.14 | 2.31 | Neff-PPAS | -VAFGSGKHIAVSPGDNTLFDAIASAE--TGDVLVLQAGEYWVSK----ILSLDKTLTIRAQEKGSAVIFPQRSTLIEINNKGNLDGVYVDATNAPDAAGNTLIRTTRLPMQRNYRLAIKNSTFENLDINHSYHFFDAGNRSFADYIEVQDSQTGDLFRLNKETDDLGIYLTIENSNVSDLQGAIAKVYRGGTDHVVMNNNIFNEVGKGKRNSAASLILHGTQVNKMTTNEFNNSAPIIFELTVGEP--KTWVTGNVFEGTPEP | |||||||||||||
8 | 5olqA | 0.15 | 0.13 | 4.35 | 1.46 | HHsearch | PEGSDS-NPGTSDKPFATLVKVQEV--VVAGDVVYINPGTYVVPANQVCVFHMNKPISYLANPNKQGR--------------------PIFDLSQVKPKDRITVFYVTGSNLYLKGFDVIGTQVTITGHTQSECFRIVANNNKFEDLRTHDG-MAIGFYLLGGSN-----NHILNCDAYNNYDGFDLIN--CFEAVKIINCWSFLNGTGFKAGGYGMAASVIPQHEVRNSLAYYNRLRGFYANHHL--GGIIFESNTAVNSGE- | |||||||||||||
9 | 5olqA | 0.13 | 0.11 | 3.97 | 1.84 | PROSPECTOR2 | PEGSDS-NPGTSDKPFATLVKVQEV--VVAGDVVYINPGTYVVPANQVPMTTTNSPISYLANPNKQ--------------------GRPIFDLSQVKPKDQRTVFYVTGSNLYLKGFDVIGTQVTITGHTQSECFRIVANNNKFEDLRTHDGGNVDGFGGHINIPSVIPQHEVRNSLAYYNRLRG-FYANHHLGGIIFESNTAVNSGENYNMTNRESPLALPYDHMVKNNLSLVTRSGSKHIV-MVNRAKSEVSNNSFDGSEEV | |||||||||||||
10 | 3vstA1 | 0.19 | 0.15 | 4.76 | 1.60 | SAM | -TGSDE-GKGTLKDPFLTINKAASV--AMAGDTIIVHEGVYREW------VKPKRRITYKAAEGEK----------------------VVIKGSEVR-----SCFETGIDYITVKGFEMAHAATPQPG------LIGWSKGWIIEDNIIHDA-KCSAISIGKEAT-KIGSHIIRNNTIYDCGQAIVGHL--GGVFSEIYNNHIYNIALGIKLHAA-------IDVQIHHNRIHDCS-LGLWLDWEA--QGTRVSKNLFYN---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |