>PF07507 (293 residues) ITVIVQGDVDGEKTPICLQSIRRALPGAFIILSTWEGTDVEGLEYDEVVFSEDPGGFDEF NVPFSPKNNINRQIVSTYHGLLKAKTVYALKLRTDFYLCDDGFKDYFNIYNRECTEYKIF EHKVICCELYSRNPRYIFSDMKRAYHPSDIFFFGYTKDLVRLFDVPLFSKEDEEYMMWKY YPNNSISTFRYDAESYLWMNLVNKGISFKAPDDLEKYTREDIDRSEATFAANLIILSNDD IGLKTLSNSIYRKEAVPQNCYTHEDWEKLYAFYCCNDAKEYIKYLLLIFVKNL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | ITVIVQGDVDGEKTPICLQSIRRALPGAFIILSTWEGTDVEGLEYDEVVFSEDPGGFDEFNVPFSPKNNINRQIVSTYHGLLKAKTVYALKLRTDFYLCDDGFKDYFNIYNRECTEYKIFEHKVICCELYSRNPRYIFSDMKRAYHPSDIFFFGYTKDLVRLFDVPLFSKEDEEYMMWKYYPNNSISTFRYDAESYLWMNLVNKGISFKAPDDLEKYTREDIDRSEATFAANLIILSNDDIGLKTLSNSIYRKEAVPQNCYTHEDWEKLYAFYCCNDAKEYIKYLLLIFVKNL | |||||||||||||||||||
1 | 6h1jA | 0.12 | 0.09 | 3.12 | 1.11 | CNFpred | VSVIMPTFNNGEKLHRTISSVLNQSTDYELIIIDDHSNDNGETL-VRFKQLKKNSGN---------------ASVPRNTGLKMSKAEYVFFLDSDDLLHERALEDLYNYGKE-------NNSDLIIGKYG-GNVAKADIIDNSIFYALSVLKMFKKSVIDKN-KIKFKT------------------FSKTAEDQLFTIEFLMNS-------------------------KNYSIKTD--YEYYIVVN-----------NQYFATINEIYKAIYKKNQEKRHQLAGKYTTRLL | |||||||||||||
2 | 6h1jA | 0.12 | 0.10 | 3.53 | 1.07 | Neff-PPAS | VSVIMPTFNNGEKLHRTISSVLNQSTDYELIIIDDHSNDKKYKGLVRFKQLKKNSGN---------------ASVPRNTGLKMSKAEYVFFLDSDDLLHERALEDLYNYGKENNS-------DLIIGKYGVENVAKADIIDNSIFYALSVLKMFKKSVIDKNIKFK--------------------TFSKTAEDQLFTIEFLMNSKNNEIYKAIYKSPIYKNQEKRHQLAGKYTTRLLRHGQKKNFANSKMKYEDKIEWLNNFSKTINKVPRDSDKYVTQIFNLKLEAIRQND | |||||||||||||
3 | 5heaA | 0.13 | 0.11 | 3.67 | 0.80 | SPARKS-K | ISIIVPVYNVEKYLKRCLDSLLRTYKNFEIILINDGSTDAKIDNRIQILHQTNAGP-----------------SAARNAGITYASGKYITFVDSDDFVEEFYLEHLYRALVDN-------GSDISVCNFNSFNEQSFLFSIT-------------------------KEKYFCKNYTIAEWMDLNLFLTFTFSPTKLFKAELFEG-----IRFPLGRLREDDATIYRLYLKAITFINEDDISSMISRIALLASMGYDLTEQSYKGRLKKCCEDANGQIELYQQCCNKLDLIEN | |||||||||||||
4 | 6h1jA | 0.13 | 0.12 | 4.11 | 0.69 | FFAS-3D | VSVIMPTFNNGEKLHRTISSVLNQTMDYELIIID-DHSNDNGETLNVIKKYKGLVRFKQLKKNSGNAS------VPRNTGLKMSKAEYVFFLDSDDLLHERALEDLYNYGKENNSDLIIGVPKAIFEKGNVAKADIIDNSIFYALSVLKMFK----KSVIDKNKIKFKT------------------FSKTAEDQLFTIEFLMNSKTDYEYYIVVNSTGNQYFATINEIYKAIYKYTTRLLRHGQKKNFANSKMKYE----DKIEWLNNFSKTINKVPRDSDKYLEAIRQNDL | |||||||||||||
5 | 1foaA | 0.11 | 0.10 | 3.55 | 0.34 | HHpred | IPILVIACDRST-VRRCLDKLLHYRELFPIIVSQDCGHEETVISAVTHIRQPDLSNIAVQP---DHRKFGYYKRWALGQIFHNFNYPAAVVVEDDLEV-APDFFEYFQATYPLLK----ADPSLWCVSAWNDNGKEQMVDKPELLYRTDFFWLLLAELWAELWPK-----AFWDDWMRPEISRMTFGRKGVSHGQ-FFDQHLKFIKLNVPFTDLSYLQQEAYDRDFLARVYGAPQLQVEKVRT---NDRKELGEV-RVQYTGRDSFKAFAKALGVMD---------------- | |||||||||||||
6 | 1foaA | 0.12 | 0.11 | 3.99 | 0.82 | MUSTER | IPILVI----RSTVRRCLDKLLHYAELFPIIVSQDCGHEIASYSAVTHIRQPDLSNIAVQPDHRKFQGYARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW---CVSAWNDNGKEQMVDSSKPELLYRTDFFWLLLAELWAELE--PKWPKAFWDDWMRRPEFGRKGVSHGQFFDQHLKFIKLNQQFVPFTQLDLSYLQQEAYDRDFLARVYGAPQLQVEKV----RTNDRKELGEVRVQYTGRDSFKAFAKAL--DDLKSGVRGIVTFLFRGR | |||||||||||||
7 | 1xhbA | 0.08 | 0.06 | 2.57 | 0.97 | CNFpred | TSVVIVFHNAWSTLLRTVHSVINRSMIEEIVLVDDASERDFL-VPVHVIRMEQR----------------SGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKH-------DRRTVVCPIIDVISFEYMAGSDMTYGGFNWKLNFRWYP-----------VPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIG--TYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVF-----------GQIINKNNRRLAEVWMD----EFKNFFYIISPGVT | |||||||||||||
8 | 1vt4I3 | 0.09 | 0.04 | 1.70 | 0.76 | HHsearch-2 | ---------------------------------------------------------------------------------------------------EYALHRSIVDYNI----PKTFDSDDLIPPYL---------DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH--DSTAWNASGSILNTLQQLKFYKPY--------ICDNDPKYENAILDFLPKI----------EENLICSK------------YTDLLRIALMA--EDEAIFEEAHKQVQRGGG | |||||||||||||
9 | 1foaA | 0.08 | 0.07 | 2.87 | 1.06 | Neff-PPAS | IPILVIACDRS-TVRRCLDKLLHYRELFPIIVSQDCGHEASYGSAVTHIRQPDLSNIAVQPDHRKFQGYARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKAD-----PSLWCVSAWNDNGKEQMVDSSKPDFFPGLGWLLLAELWAELEPK--WPKAFWDDWMRRPEQRKGRFGRKGVSHGQFFDQHLKFIKLNQQFVPFTQLDLSYLQQEAYDRDFLARVYGAPQLQVEKVRTNDRKELGEVRVQYGRDSFKAFAKALG----------VMDDLKSGV | |||||||||||||
10 | 5heaA1 | 0.16 | 0.10 | 3.40 | 0.57 | HHsearch | ISIIVPVYNVEKYLKRCLDSLLRTYKNFEIILINDGSTDNSSCNRIQILHQTNAG-----------------PSAARNAGITYASGKYITFVDSDDFVEEFYLEHLYRALVDNG-------SDISVCNFNSFNEDRQFLFSIKNYTIAEWMDLN---LFLTFTFSPLFKAELFEG--------IRFPLGRLREDDATIYRLYLKA-------------------------SQITFINEG-S-YYYSQR--------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |