>PF07271 (288 residues) FSLKKLKSKLVGVSFVFSGVIALGTGVGLTSEHKYEHSPTLVLHEGETNSVGPRKITSEP WFYPVVGAGAGLIVVSLLLGLGIGIPIAKKKERMMIQEREEHQKMVESLGIIEEQNKTEA IEPTEEVNTQEPTQPAGVNVANNPQMGINQPQINPQFGPNPQQRINPQCFGGPMQPNQMG MRPGFNQMPPQMGGMPPNQMGMRPGFNQMPPQMGGMPPRPNFPNQMPNMNQPRPGFRPQP GGGVPMGNKAGGGFNHPGTPMGPNRMNFPNQGMNQPPHMAGPRAGFPP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | FSLKKLKSKLVGVSFVFSGVIALGTGVGLTSEHKYEHSPTLVLHEGETNSVGPRKITSEPWFYPVVGAGAGLIVVSLLLGLGIGIPIAKKKERMMIQEREEHQKMVESLGIIEEQNKTEAIEPTEEVNTQEPTQPAGVNVANNPQMGINQPQINPQFGPNPQQRINPQCFGGPMQPNQMGMRPGFNQMPPQMGGMPPNQMGMRPGFNQMPPQMGGMPPRPNFPNQMPNMNQPRPGFRPQPGGGVPMGNKAGGGFNHPGTPMGPNRMNFPNQGMNQPPHMAGPRAGFPP | |||||||||||||||||||
1 | 3jc8Na | 0.10 | 0.07 | 2.70 | 1.28 | SPARKS-K | -------------------------------------------MMIRINLLPVRAVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEDALRKGRSGPVRMMDLASATPKKVWVKTFSEN-----NNAVSDGSAVSHDEVAEFMRG--LNGVVWTPKGMGRLVDRRRDSKTARVEMLTS-----DATIEEFPEAQVSPFFKNQTAKQVGGAQVGVPILVEFKITMTSNY----------------------- | |||||||||||||
2 | 6etxG | 0.08 | 0.08 | 3.16 | 1.21 | MUSTER | LTQKLLYQALKNLVMQFRKVCNLFERQETWSPFHISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLIT | |||||||||||||
3 | 3cnfT | 0.08 | 0.07 | 2.93 | 1.23 | Neff-PPAS | -TITSHTLRLLGPFQYF-----------NFSETDRGHPLFRLPLKYPSKAIPADELIDRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLHTFHYRSESDMIDHFAAKILEDWRQKEKLDKGALVEADRVALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPSMNYISNTGQGRIKHSLAV | |||||||||||||
4 | 4k0mC | 0.04 | 0.03 | 1.41 | 1.44 | PROSPECTOR2 | KVYTIDEA-----------------------ARTAKFDETVEVHAKLGIDPRR--------------------------------------------------------------------------SDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-AA | |||||||||||||
5 | 6f1ti | 0.07 | 0.06 | 2.35 | 1.06 | SPARKS-K | DGSGKTTLMTKLQHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKVSAESLPETLVIFVADMSRP-------WTVMESLQKWASVLREHIDKMKIPEKMRELERKFVKDFQDYME----------PEEGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-----------------AALIYTSVKEEKN--LDLLYKYIVHFTTPALVVEKDAVFIPAGWDNEK--------KIAILHENFTTVKPEDAYEDFIVFLMKQQ | |||||||||||||
6 | 3cnfB | 0.08 | 0.08 | 3.14 | 0.64 | FFAS-3D | -NVVNERAVQDDMQKLETQFDNIAVAHTDHLSVVYAFATHVAVVLYQSGVINGPAVMPDYYDVVSRFANANLQMNNIFDQADFIQTSDAVRQRHAIERIAQITDYGKLTLRFLGTLTRSLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNPPDPDFVPDVPGYVAVQYAHRLFSSSLANKRNRVTYTHPPTGMAYPSPTGRPHVHMTINERAGMSKLVADNIIASVIKSNWMDGLLYPLQPISVARSMRAIVNHNEVDRPRTG--- | |||||||||||||
7 | 3j5pB2 | 0.12 | 0.05 | 1.61 | 0.36 | HHpred | VMIEKIRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLSFTIGMGDLEF---TENYDFKAVFIILLLAYVILTYILLLNMLIALM-GETVNK--IAQESKNIWKLQRAITILDTEKSF------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6d4hA | 0.09 | 0.09 | 3.52 | 1.13 | MUSTER | FQLFKLGCYIQ-GKFLVVGLLIFGAFAVGLKAANLETNVELWVEVGGRRQKIGEEAMFNPQLMIQTPKEEGANVLT-TEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVD-SWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHMTPKQMYEHFKGYEYVSHINWNE | |||||||||||||
9 | 2v50A | 0.12 | 0.03 | 0.97 | 0.68 | CNFpred | -----RATLIPTIAVPVVLLGTFGVLAAF--------------------------------GFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 2pffA1 | 0.15 | 0.07 | 2.23 | 0.68 | HHsearch-2 | HIDSKSEFALGCVKKQKSARGIETRPAQVILPMSPNHGTLNRWHS-ESWATVCGAIIGWTRGT--GLMSANNIIKEMAFNLLGLLTPEVVELCQKPELKEFTAKLRKELVETSEVRKAVSIETALEHKVVNGN----------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |