>PF07174 (293 residues) MDQQDAVRVHRKGLSKSLAIAALTGATAVALALPSIAQAQPAPTPAPPPPPPSGNTFLQG PPPPPGAPAPPPPPADPNAPPPPPPADPNAPPPPPADPNAPPAPPPVEAGRVDNAAGGLS FVVPAGWKVSDSTQLSYGQALLTKIAPEGAEPPNDTSVLLGRLDLKLFAGAETDNTKAAQ RLASDMGEFFMPFPGTRINQKTVPLDAAGMPGVASYYEVKFTDANKPTGQIWAGVVGEPV EPGTPRGQRTPQRWFVVWLGTATNPIPQEEAVTLANSIRPYTAPAAPPPADPN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MDQQDAVRVHRKGLSKSLAIAALTGATAVALALPSIAQAQPAPTPAPPPPPPSGNTFLQGPPPPPGAPAPPPPPADPNAPPPPPPADPNAPPPPPADPNAPPAPPPVEAGRVDNAAGGLSFVVPAGWKVSDSTQLSYGQALLTKIAPEGAEPPNDTSVLLGRLDLKLFAGAETDNTKAAQRLASDMGEFFMPFPGTRINQKTVPLDAAGMPGVASYYEVKFTDANKPTGQIWAGVVGEPVEPGTPRGQRTPQRWFVVWLGTATNPIPQEEAVTLANSIRPYTAPAAPPPADPN | |||||||||||||||||||
1 | 5zx9A | 0.60 | 0.32 | 9.30 | 2.49 | SPARKS-K | ------------------------------------------------------------------------------------------------------------PVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTFPGQPPPVDTRIVLGRLD----QKLYATDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGS-----------PPQRWFVVWLGTANNPVDKGAAKALAESIRPLV----------- | |||||||||||||
2 | 5zx9A | 0.60 | 0.33 | 9.39 | 2.29 | FFAS-3D | ------------------------------------------------------------------------------------------------------------PVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGQPPPVANDTRIVLGRLDQKLYA----TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIG-----------SPPQRWFVVWLGTANNPVDKGAAKALAESIRPLV----------- | |||||||||||||
3 | 5gaoE | 0.16 | 0.14 | 4.76 | 1.16 | PROSPECTOR2 | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----AAAARAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||||||
4 | 5zx9A | 0.60 | 0.33 | 9.39 | 8.13 | HHpred | ------------------------------------------------------------------------------------------------------------PVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPPVANDTRIVLGRLDQKLYA----TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGS-----------PPQRWFVVWLGTANNPVDKGAAKALAESIRPLV----------- | |||||||||||||
5 | 5zx9A | 0.60 | 0.33 | 9.39 | 1.70 | MUSTER | ------------------------------------------------------------------------------------------------------------PVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGQPPPVANDTRIVLGRLDQKLYA----TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGS-----------PPQRWFVVWLGTANNPVDKGAAKALAESIRPLV----------- | |||||||||||||
6 | 2nbiA1 | 0.12 | 0.12 | 4.20 | 1.04 | PROSPECTOR2 | QPSDLNPSSQPSECAD-----VLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPAPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQC--PIDECFLPYGDSSRPLDCTDPAVNNCPACCA-FECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIKSDSARPPDCTAVGRPDCNVLPFPNTPAPSSAPTR | |||||||||||||
7 | 2lnjA | 0.16 | 0.09 | 2.83 | 1.53 | CNFpred | -------------------------------------------------------------------------------------------------------------QRYSDTKDGYEFLYPNGWIGVDVKGASPGVDVVFRDL---IERDENLSVIISEIPSDKTLTDLGTATDVGYRFMKTVNDASQ--DRQAELINAEARDEDGQVYYTLEYRVLVG------DNVERHDLASVTTN--------RGKLITFDLSTAEDRWVKSLFDTVASSFHVY------------ | |||||||||||||
8 | 1mv3A | 0.13 | 0.08 | 2.85 | 1.02 | PROSPECTOR2 | DGSPAATPEIR-------------------------VNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSS-----------LPAVVVETFP------------------------------------ATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTD-------------ELQLKAGD-----VVLVIPFQNPNQHKKLEK-----------------CRP | |||||||||||||
9 | 5zx9A | 0.60 | 0.33 | 9.39 | 5.87 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------PVRIDNPVGGFSFALPAGWVESDAAHFDYGSALLSKTTGDPPGVANDTRIVLGRLDQKLYA----TDSKAAARLGSDMGEFYMPYPGTRINQETVSLDANGVSGSASYYEVKFSDPSKPNGQIWTGVIGS----------P-PQRWFVVWLGTANNPVDKGAAKALAESIRPLV----------- | |||||||||||||
10 | 4uxeA | 0.11 | 0.11 | 3.91 | 1.00 | PROSPECTOR2 | LTQQTNLSAPLVSSSTGEFGGSLAANRTFTIRNTGAPTSIVFEKGPASGANPAQSSIRVWGNQFGGGSDTTRSNGTVPININASGLNVNGTATFGRSVTANGEFISKSAGFFIRNDASNTYFLLTAAGDQTGGFNGLRPLLINNQSGQGGLTVNSRIRSQGTKTSDLYTRAPTSDTVGFWSIDINDSATYNQFPGEKTNEVTGLPYLERGEEVKSPGTLTQFGNTLDSLYQDWIT-------YPTTPEARTTRWTRTWQKDGGNPPQPSDI----GALPSDNATGNLTIRDFV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |