>PF07136 (241 residues) MPIIRGMFAFIDSMVIGVQALTFSAEFFEDEEPKEEKKASKLDEFMEKNMIAIAVLLSIA FSTGLFILLPTLAVSLLGKVSKTPLLMNLVEGVVRIAIFIGYIALISQMKDIKRVFEYHG AEHKTIFCYENGEELTVENVRKHKRLHPRCGTSFLFIVMIVSILLFSFFRWPSLPVRLIT RILLLPVVAGISYEIIKWAGRSDSKLVCTISAPGLWLQKITTREPDDSQIEVAITALKNV L |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MPIIRGMFAFIDSMVIGVQALTFSAEFFEDEEPKEEKKASKLDEFMEKNMIAIAVLLSIAFSTGLFILLPTLAVSLLGKVSKTPLLMNLVEGVVRIAIFIGYIALISQMKDIKRVFEYHGAEHKTIFCYENGEELTVENVRKHKRLHPRCGTSFLFIVMIVSILLFSFFRWPSLPVRLITRILLLPVVAGISYEIIKWAGRSDSKLVCTISAPGLWLQKITTREPDDSQIEVAITALKNVL | |||||||||||||||||||
1 | 5u71A1 | 0.10 | 0.10 | 3.54 | 1.14 | SPARKS-K | MGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLK--AGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRPIFTHLVTSLKG----LWTLRAFGRQ-PYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILT-TGEGEGRVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVF | |||||||||||||
2 | 5c6gA | 0.10 | 0.09 | 3.40 | 1.09 | FFAS-3D | --LFQSVSYLTTSTKFLPKVLKTSQELKETLQKRTSLVHVQSIRNIYDKVVDLCRFYQTWESLILYNILLEAISSQQAQQADLSHVGRLYSTLLRLIGIAHLYTLIVAWEQLQHAYLSSSLVQAILWAISRFEPFSMQQLNEFFTDNALFKKKSLLLHFLLNYLGGTMLVSD------------VQKRCDISSSCFQMGKQQYMPGMRYVA--GIWHLMNSTVAMKTKEVAITRAKLEGLV | |||||||||||||
3 | 3rkoC | 0.10 | 0.08 | 3.08 | 1.03 | CNFpred | ---GLSLLMVVLTGLLGVLAVLCSWKEI-----------EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPM---YFLIALWG-AATKFFIYTQASGLVMLIAILALVFVHYN----------VWTFNYEELLNTPMS---GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA---YGLLRFSLPLFPNASAEFA----PIAMWLGVIGIFYGA | |||||||||||||
4 | 5k7vA | 0.12 | 0.10 | 3.69 | 1.10 | SPARKS-K | -------------------IEEVVAEMIDILAESSKKSIEELARAADNKTTEKAVAEAIEEIARLATAAIQLIEALAKNLASEEFMARAISAIAELAKKAIEAIYRLAARAIAAIANLAVTAILAIAALASNH--------TTEEFMARAISAIAELAKKAIEAIYRLADTDKFMAAAIEAIALLATLAILAIALLAFMAKAISAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEKIA | |||||||||||||
5 | 3g61A4 | 0.10 | 0.09 | 3.41 | 1.06 | FFAS-3D | --ISMGAAFLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFWRILKLNSTVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKVFKSMLRQDVSWFDDPKN-----TTGALTTRLANDAAQVK------GATGSRLAVIFQNIANLGTGIIISLIYFENVLLVFSAIVFGAMAVGQVSSFAPTVSASHIIRIIEKT- | |||||||||||||
6 | 5tj5A | 0.15 | 0.13 | 4.31 | 0.35 | HHpred | ----HGFLMTLAALSLVLNEKKINKMLYNGTEN-ALLFSNSYK---MKLSILIHMTYSYFFSLGIFGYLSVCIVYWAVDWVAPGLLNMLINAKVQVFLLLMALVCIPWLLLVKPLHFKF--DHQVIHTIEFCLN-CVSHTASYLRLWAQL--SSVLWTMTIQIA----FGFRGF-VGVFMTVALFAMWFALTCAVLVLMEGT-SAMLHSLRLHWVESMSK--------------------- | |||||||||||||
7 | 3gi9C | 0.13 | 0.12 | 4.17 | 0.85 | MUSTER | SGMIFASAIFFLSYM-GFGVITNASEHI-----------ENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIY-GGANVAYSLAKDGE-L-----EFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVL | |||||||||||||
8 | 5gpjA | 0.13 | 0.11 | 3.91 | 1.01 | CNFpred | VSFLLGGVTSLVSGFLGMKIATYANARTTLE-------ARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYY---DDWGGLFEAITGYGLGGSSMALFGRVGIYTKAADVG-RNPAVIADN------VGDNVGDIA-----GMGSDLFGSYAESSCAALVVASISSFGLTAMLYPLIVSSVGILVCLLTTLFA-VKEIEPALKKQLVISTVLMT----IGVAVVSFVALPTSF | |||||||||||||
9 | 1vt4I3 | 0.15 | 0.09 | 2.94 | 0.58 | HHsearch-2 | ----------------------------------EY--------ALHR-SI------------VDHYNIPKTFDDLIPPYLDQYFYSHILKNIEHPERMTLFRMV---FLDFRF------LEQKIRHDSTA---------------WNASGSIL-NTLQQLKFYKPYICDNDPKYERLVNAI--LDFL-----PKIEENLIC-SKYTDL--------LRIALMAEDEAIFEEA---HKQVQ | |||||||||||||
10 | 6cc4A2 | 0.06 | 0.05 | 2.32 | 0.85 | Neff-PPAS | FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQG-------EDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLAS--LVGAILNTWN----------------------RFSIPAFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLAS- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |