>PF06834 (289 residues) XCIFPLSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSP GCMVNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDL DIAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQ GSMYPFNGWVSNESSPLQSSLLVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKER WRYQMVNMYPDSGQCHPFGRSVTRWETGKNPPNTKKNFGYLMWRKRNCV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | XCIFPLSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTAKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLDIAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAADAIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSLLVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKERWRYQMVNMYPDSGQCHPFGRSVTRWETGKNPPNTKKNFGYLMWRKRNCV | |||||||||||||||||||
1 | 3iz3A | 0.05 | 0.04 | 2.11 | 0.78 | SPARKS-K | ISADFIICDINSYEDQSFESSAATRALVKINHGGVFYHTALLKTASYSYETYIYITPIFPFYSNSAMINMPIIPSIHTVIKGHSNTYSPGLFCGCVDVQSAPLALSQLKS-YCSE--------ATTWRVDSDDNLVNIIARIDP------------ARIALEFRTRSNTSAYHEYQRYVPNGLGFKVEFRYMHREV--------TFIHKLMMYALIREQISLTENMGRNLADISVVPLNMKYVVIDPATRIETLKNIEVQSRPFQFDAANMDLENNSIYLFIAVIMNE- | |||||||||||||
2 | 3m1cA1 | 0.16 | 0.11 | 3.55 | 0.37 | FFAS-3D | ASTWPVGVWTTG-------------GLAFGCDAALVRARYMGLVISMRDPAEIIVVPADKTLARVGNPTDENAPAVLPGPPAGPR-------YRVFVLGAPNGSALDALRRVAGYPEESTNYAQLGEDPGSGTDARPSLFWRLAGLL----ASSGFAFVNAAHAHDAIRLSDLLGAAGCAADSVFLNVSVLDPAARLRLEARLGHLVAAILERE--------------------------------------------------------------------------- | |||||||||||||
3 | 5t96A | 0.18 | 0.10 | 3.37 | 0.32 | HHpred | -------------------PTGAIVGLVGRTDAV-TGFSVKVL--TFSSPT--IVVVGLNGMSGIYK-VCIAATSGGLING-CGYFNTPLRFDNFQG---------------------Q---IYVSEVRGTNKSDTPL------------------CSHIM----RNVELDEYVD-TPNTGGVYPSDGFDSLHG-----SASVRTFLTDALTCPDIDWSRID--AASCEYDSCPKMVKDFDQT---------------------------------------------- | |||||||||||||
4 | 5az4A | 0.12 | 0.11 | 3.94 | 0.77 | MUSTER | KVNLDITLNGVRIQNADIQSIDDAIAYINTFTAPTDTRDGTGVKAVK-DGSGIDFVNDNADGTNTAGELWNAVWNNNNQTFTFNNNGNGQAGTPTINKNGSSLWTATNITFTPQPPQAATNVQLT-------GGLNAQIITAHKYIYSSNPVDIGPMYNPDGGPAFQPGANATTRPTEPGSAAYWVNGGLLNTNVRTFRTTEDLRELLQRDARYGVDYDGSGTFAAADINQNIKVVVTADGHFAISNANEQSTV-----PPNAINGVGNATTTDPKNMSFNITAYSNKQ | |||||||||||||
5 | 2pffB | 0.15 | 0.15 | 4.99 | 0.73 | HHsearch-2 | HVLLVTFIASQLQEQFNLPEPEADDEPTTPAELV---GKFLGYVSSLVEPSKVGQFTEFENCYLEGNDIQENDTTLDKKSNSEGNAQLVAIFGNTDDYFEELRDLYQTIRTTLDAEKQGLNILEWLENPNTDKDYLLSI---PISCP-LIGVIQLAHYV-VTAKLLGFTPGELRYLKGATGHSQGLVTAIAETDESFFVSVRKAITVLFFIGVRCYYPNTSLPSDSLNEGVPSPMLSIKQVEISLVNGAKNLVAKAPSGLDQSKFS-NRFLPVASPFHSHLLVRIVDCI | |||||||||||||
6 | 5az4A | 0.12 | 0.11 | 3.94 | 0.54 | Neff-PPAS | KVNLDITLNGVRIQNADIQSIDDAIAYINTFTAPTDTRDGTGVKAVK-DGSGIDFVNDNADGTNTAGELWNAVWNNNNQTFTFNNNGNGQAGTPTINKNGSSLWTATNITFTPQPPQAATNVQLT-------GGLNAQIITAHKYIYSSNPVDIGPMYNPDGGPAFQPGANATTRPTEPGSAAYWVNGGLLNTNVRTFRTTEDLRELLQRDARYGVDYDGSGTFAAADINQNIKVVVTADGHFAISNANEQSTV-----PPNAINGVGNATTTDPKNMSFNITAYSNKQ | |||||||||||||
7 | 6d7kD | 0.16 | 0.03 | 1.16 | 0.51 | HHsearch | -------------------------------------------------------------------------------------------------------------SRILIHS-DARYEAFTVDLDYMWRWEILRDG---------------------------E----F-VQEGC--SL------------SFDSSRKAVAHVLSHFKRQDEAAQR--------------------------------------------------------------------- | |||||||||||||
8 | 6gejM | 0.06 | 0.06 | 2.37 | 0.69 | SP3 | VC----------NHPNLFEVRPILTSFV---LEHCVASDYKDVE------RTLLKLFKKNNQVNRVDLDFLNLVFTLNDKDLTSYHAEEISKLTC---VKNFVEEVNKLRETNKQLQEEFGEASFLNFQDANQYFKYSNKQKLEGTVDMLNFLKMVNKLRCDRRPIFGKNLIDLLTKDRRVKYDKSSIIDNELIKPLQTRVLDNRKIIDTFAVLTPSAVSLDMRKLALGLNDDSSVGENTRLKVMQNCFEVSNPLHQLQTKLTIAFPDKSLLQYD-------------C | |||||||||||||
9 | 4dtdA | 0.08 | 0.07 | 2.78 | 0.93 | PROSPECTOR2 | TKATPNELAGLVVAPANSAQAQGDALFLTKDQDGKNYQNWQTHTVELHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAESQGQTITTPSGQQATVFGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAELA--------------KKFGIYINEWDPSEQITPNANGLTDPKVKNAWKPSKIVEILSKS--DAKAVKHIKPQLQSRYSESLSKNVFQY-----------FQDGGEVAGHGINNATVGDKHSPELAILFEFRTVP | |||||||||||||
10 | 1z27A | 0.20 | 0.09 | 3.00 | 0.45 | FFAS03 | ---------------------------------------------------QLVQMSNHFKCMCNEGLVHLSENTCEEKNECKKETLGKAC-AQVNMYKCGCIEVLDVCQYKNCGESGECIVEYLSEIQSAGCSCAIGKVPNPEDEKKCTKTGETACQLKCTDNEVCKNVEGVYKCQCMEGFTFDKEKNV--------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |