>PF06800 (279 residues) VIALIPAVMWGIMPLVVSKIGGKPKQQIIGTTLGALVFALGVFFFTNPEYTATIIIASFI SGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSAL ALIIIGIFLTSYQQNKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQA IGMVIAGLLFSIKSEEKRFTKQTWLNMIPGIMWATGNLALLFSNKLVGIATGFSLSQMGV VISTIGGILFLGEKKTKKELVLVIIGVILVIIGGTMIGI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | VIALIPAVMWGIMPLVVSKIGGKPKQQIIGTTLGALVFALGVFFFTNPEYTATIIIASFISGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQNKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQAIGMVIAGLLFSIKSEEKRFTKQTWLNMIPGIMWATGNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKELVLVIIGVILVIIGGTMIGI | |||||||||||||||||||
1 | 5i20A | 0.12 | 0.12 | 4.16 | 2.43 | SPARKS-K | LIGFTAILLWSTLALATSSTGAPFLLTALTFTIGGAVGIAAGLARGV-SVLRQPWPVWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAY-LWPLLIVLFSAFLPGERLRP----AHVAGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPSVWPEWLAVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSG----ALAIACALIVGGAAVATL | |||||||||||||
2 | 5i20A | 0.12 | 0.11 | 4.06 | 2.51 | FFAS-3D | LIGFTAILLWSTLALATSSTGAPPFLLTALTFTIGGAVGIAAGLARGVSVLRQPWPVWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAYLWP-LLIVLFSAFLPGERLR----PAHVAGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPSVWSEWLAVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPS----GALAIACALIVGGAAVATL | |||||||||||||
3 | 5ogeA | 0.12 | 0.11 | 3.95 | 2.32 | HHpred | ISILSYCGSSILMTVTNKFVVNDNFMLFVQSLVCTITLIILRILG-FRSLNKTDAKNWFPISFLLVLMIYTSSKALQYLAVPIYTIFKN-LTIILIAYGEVLFFGGSVTSMEL----SSFLLMVLSSVVATWGDQA----VASFNPGYFWMFTNCITSALFVLIMRKRLFKDFDTMFYNNVLALPILLLFSFCVEDWNFSNDSLTAIISGVASVGISYCSGWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPRNFL----SILSIFIGFLSGIIYAV | |||||||||||||
4 | 5i20A | 0.13 | 0.13 | 4.35 | 1.98 | MUSTER | LIGFTAILLWSTLALATSSTGVPPFLLTALTFTIGGAVGIAAGLARGVSVLRQPWPVWVHGIGGLFGYHFFYFSALKLAP-PAEAGLVAYLWPLLIVLFSAFLPGERLR----PAHVAGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPSVWPSEWLAVVALGIGVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPS----GALAIACALIVGGAAVATL | |||||||||||||
5 | 5y78A | 0.16 | 0.15 | 5.00 | 1.68 | CNFpred | FLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGKPNVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKS-AEPVFGAVGSALVLGEFFHPLT----YLTLVPIVSGVALSAATE-------TFTWTGFITAMISNVAFVTRNITSKFTMV-TLIAQNTYALITIISFFMELPFALLM-VSKAKLFIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRL----NFIGSTIAIIGTMLYSL | |||||||||||||
6 | 5i20A | 0.15 | 0.14 | 4.73 | 2.69 | HHsearch-2 | LIGFTAILLWSTLALATSSTGVPPFLTALTFTIGGAVGIAAGLARGV-S-VLRQPWPVWVHGIGLFGYHFFYFSALKLAPPAEAGLVAY-LWPLLIVLFSAFLPGERLRPAHV----AGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPSVWG-SEWLAVALGIGVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGA----LAIACALIVGGAAVATL | |||||||||||||
7 | 5i20A | 0.12 | 0.12 | 4.16 | 2.60 | Neff-PPAS | LIGFTAILLWSTLALATSSTGVPPFLLTALTFTIGGAVGIAAGLARGVSVLRQPWPVWVHGIGGLFGYHFFYFSALKLAPPAEAG-LVAYLWPLLIVLFSAFLPGERLR----PAHVAGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPSVGSEWLAVVALGIGPVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPS----GALAIACALIVGGAAVATL | |||||||||||||
8 | 5i20A | 0.15 | 0.14 | 4.73 | 4.00 | HHsearch | LIGFTAILLWSTLALATSSTGVPPFLTALTFTIGGAVGIAAGLARGV--SVLRQPWPVWVHGIGLFGYHFFYFSALKLAPPAEAGLVAY-LWPLLIVLFSAFLPGERLRPAHV----AGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPSVWG-SEWLAVALGIGVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGA----LAIACALIVGGAAVAT- | |||||||||||||
9 | 5i20A | 0.13 | 0.12 | 4.25 | 2.09 | PROSPECTOR2 | LIGFTAILLWSTLALATSSTGAVPLLTALTFTIGGAVGIAAGLARGVSVLRQP-WPVWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAY-LWPLLIVLFSAFLPGERLRPAHV----AGALMGLAGTVVLLGARAGGFGFAPEYVPGYLAAAACAVIWSVYSVASRRFARVPTEVVAGFCLATAALSALCHILFEPSVWPVGSEWLAVVALGVGIAFYTWDIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGA----LAIACALIVGGAAVATL | |||||||||||||
10 | 6i1rA | 0.12 | 0.11 | 4.04 | 2.24 | SAM | -VAALLTILTSSQGILTTLSQYDYAIPFLAELFKLSVSGFFLWKECRTTKEWRSVRLYVVPSVIYLIHNNVQFATLTYVDPSTYQIMGN-LKIVTTGILFRLVLKRKLSNIQW----MAIVLLAVGTTTSQVKGCGDSSLFSAPLEGYLLGILSACLSALAGVYTEYLM-SLYWQNVQLYTFGVIFNMGWLIYG--AGLNGYSITTWMVVFNLGSTGLLVSWLMKYSDNIVKVYSTSMAMLLTMVLSIYLFSVKATIQ----LFLGIIICIISLQM--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |