>PF06705 (247 residues) NNTKIKIKRLCEKIEGFEKEIKNEILQKKNVEKEKIYIIREAINKLEKNLNNEIKKRIEH NRNIQNIFSSEILKVQEKIENVVHDKVYEIENAIKVLNEKINNISSNIENEKVKCIQSLE KKNNNIAKEFATLQSNFQQEKIHNKEKENNICKKLEEIEKKNEAKIDTEKNIRDSKYQEI ISYIEEIKREKKGKNENFQNFVLEEIATIKNGLIMESQAREAADDDIVQAVNHYTKALQD SLRLINS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | NNTKIKIKRLCEKIEGFEKEIKNEILQKKNVEKEKIYIIREAINKLEKNLNNEIKKRIEHNRNIQNIFSSEILKVQEKIENVVHDKVYEIENAIKVLNEKINNISSNIENEKVKCIQSLEKKNNNIAKEFATLQSNFQQEKIHNKEKENNICKKLEEIEKKNEAKIDTEKNIRDSKYQEIISYIEEIKREKKGKNENFQNFVLEEIATIKNGLIMESQAREAADDDIVQAVNHYTKALQDSLRLINS | |||||||||||||||||||
1 | 4tqlA | 0.10 | 0.09 | 3.40 | 1.36 | SPARKS-K | ------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG--------------------- | |||||||||||||
2 | 2tmaA | 0.11 | 0.11 | 3.82 | 1.99 | FFAS-3D | DAIKKKMQMLKLDKENALDRAEQAAEDRSKQLEDELVSLQKKLKGTEDELDKDAQEKLELAEKKATDAEADVASLNRRIQ-LVEEELDRAQERLATALQKLEEAEKAADESERGMKVI-ESRAQKDEEKMEIQEIQLKEAKHIAEDADRKY-EEVARKLVIIESDLEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEDKYEEEIKVLSDKLKEAETRAEFAERSV-TKLEKSIDDLEDELYAQK- | |||||||||||||
3 | 4tqlA | 0.11 | 0.10 | 3.65 | 1.39 | MUSTER | ------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQG-KQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDELLEKIKKNI-----------DDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG--- | |||||||||||||
4 | 4tqlA | 0.10 | 0.09 | 3.33 | 1.69 | Neff-PPAS | ------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDD----------ELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG--- | |||||||||||||
5 | 2yfaA | 0.09 | 0.08 | 3.12 | 1.27 | PROSPECTOR2 | GSHMGDIGQLNKDLTDLRIARLQGDDTAAANTLAKLDAFSKQQAYLATTFKPENVKLLGELGDTISAYKLSLNKMRQ-GYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQ-YQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRD---------AVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQL------ER | |||||||||||||
6 | 4uosA | 0.15 | 0.11 | 3.57 | 1.13 | SPARKS-K | -----------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG--------------------------------------- | |||||||||||||
7 | 6irdB | 0.10 | 0.09 | 3.46 | 1.81 | FFAS-3D | -----RIEDLMAAYLAHLAAQQAELNSLKAAHAAEHSTMQKLHCTQVDKIVAQYDKEKSTHEKILEKAMKKCLEIKKETEIKIQTLTTDHKSKVKEIVAQHTKEWSEMINTHSA--EEQEIRDLHLSQQCELLRKLLINAHEQQTQ---QLKLSHDRESKEMRAHQAKISMENSKAISQDKSIKAERERRVRELNSSNTKKFLEERKRLAMKQSKEMDQLKKVQLEHLEFLEKQNEQAKEMQQM--- | |||||||||||||
8 | 5nnvA | 0.10 | 0.09 | 3.45 | 1.23 | MUSTER | --AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ-LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL-------------- | |||||||||||||
9 | 5nnvA | 0.10 | 0.09 | 3.43 | 1.62 | Neff-PPAS | -----------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRK--EVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ--LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQK | |||||||||||||
10 | 4tqlA | 0.12 | 0.11 | 3.98 | 1.27 | PROSPECTOR2 | YKQMQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGD------KQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDELLEKIKKNIDDLKKIAEDLIKKAEENIKEA-----------KKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLK---G | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |