>PF06685 (253 residues) QVSNALFELTINSGIFPREALTKAIELREQVTPRLLGYLETTEKYAYEQRDNDNLMLHIY ALYLLAQFREQRAYPIIINFFSLPGKISLEITGDVVTEDLHRILASVYDGDDTLLKNLIE DEQVNEYVRDAGIRTFVTLVVCGQKSRDEVIAYLKTLFGKLERKPSFTWNSLVYVCMDLY PEEVDAEIRQVAKEGLTEEVLLTKEINILGLHEEALKKSYALGKEKTLEKLQNDDHYTLI DDTIRELKDWSCF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | QVSNALFELTINSGIFPREALTKAIELREQVTPRLLGYLETTEKYAYEQRDNDNLMLHIYALYLLAQFREQRAYPIIINFFSLPGKISLEITGDVVTEDLHRILASVYDGDDTLLKNLIEDEQVNEYVRDAGIRTFVTLVVCGQKSRDEVIAYLKTLFGKLERKPSFTWNSLVYVCMDLYPEEVDAEIRQVAKEGLTEEVLLTKEINILGLHEEALKKSYALGKEKTLEKLQNDDHYTLIDDTIRELKDWSCF | |||||||||||||||||||
1 | 4xl5C | 0.14 | 0.13 | 4.29 | 1.03 | SPARKS-K | KVEMYIKNLQDDSPPVRVYAAFALGKIDERAVEPLIKALERAVEPLIKALKDEDGYVRTAAAEALGQIGDERAVEPLIKALKDED--------PWVRLTAARALGEIDERAVEPLIKALKDE--DPWVRLTAARALGQIG------DERAVEPLIKAL---KDEDASVRKAAAVALGQIGDERAVEPLIKALK---------DEDEYVRQRAASALGKIGGERVRAAMEKLAEP----APGFARKVAVNYLET | |||||||||||||
2 | 4xl5C | 0.15 | 0.13 | 4.39 | 1.21 | FFAS-3D | KVEMYIKNLQDDSPPVRVYAAFALGKGDERAVEPLIKAL-----------KDEDASVRYAAATALGQIGDERAVEPLIKALKDEDGYVREALGQIGDERAVEPLIKALKDEDPWVRLIKALKDEDPWVRLTAARALGQI------GDERAVEPLIKA---LKDEDASVRKAAAVALGQIGDERAVEPLIKALKDE--DEYV-------RQRAASALGKIGGERVRAAMEKLAEPAPGFARKVAVNYLET---- | |||||||||||||
3 | 4xl5C | 0.14 | 0.12 | 4.18 | 1.03 | CNFpred | KVEMYIKNLQDDSPPVRVYAAFALGKIDERAVEPLIKALKDE-----------DASVRYAAATALGQIGDERAVEPLIKALKDE--------DGYVRTAAAEALGQIGDRAVEPLIKALKDE--DPWVRLTAARALGEIGD------ERAVEPLIKALKDE---DPWVRLTAARALGQIGDERAVEPLIKALK--DEDASVRKAAAVALG-AVEPLIKALKDEDEYVRQRAASALGKIGGERVRAAMEKLAEP | |||||||||||||
4 | 4xl5C | 0.15 | 0.13 | 4.50 | 1.11 | Neff-PPAS | KVEMYIKNLQDDSPPVRVYAAFALGKIGERAVEPLIKALKD-----------EDASVRYAAATALGQIGDERAVEPLIKALKDED--------GYVRTAAAEALGQIGDERVEPLIKALKDE--DPWVRLTAARALGEIGD---------ERAVEPLIKALKDEDPWVRLTAARALGQIGDERAVEPLIKALKDEPLIKALKDEDEYVRQRAASALGKIGGERVRAAMEKLAEPAPGFARKVAVNYLETHK-- | |||||||||||||
5 | 4d4zA | 0.13 | 0.11 | 3.97 | 1.04 | PROSPECTOR2 | GVDAIGQTLVDPKQPLQFRALFTLRGLGPGAIAWISQAFD-----------DDSALLKHELAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEIEVAETCQLAVRRLEERDVGRLREALLDESRPLFERYRAMFALRNA------GGEEAALALAEGLH---CGSALFRHEVGYVLGQLQHEAAVPQLAAALARCTENPMVRHEGAIARPACLAALQAHADDPERVVRES---------CEVALDMYEHE--- | |||||||||||||
6 | 1oyzA | 0.14 | 0.12 | 4.05 | 1.19 | FFAS-3D | NDDELFRLLDDHNSLKRISSARVLQLRGQDAVRLAIEFC-----------SDKNYIRRDIGAFILGQIKICKAIESTAQRCKKNPIYSPKIVSTNVRRATAFAISVI--ATIPLLINLLKDP--NGDVRNWAAFAININKYDN--------SDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDII-----------EAAGELGDKTLLPVLDTLYKFDDNEIITSAIDKLKR---- | |||||||||||||
7 | 4zv6A | 0.15 | 0.13 | 4.39 | 1.00 | CNFpred | AVEPLIKALKDEDWLVRFSAARALGEIDERAVEPLIKALKDE-----------DSSVRFSAAYALGKIGDERAVEPLIKALKDE--------DPRVRRIAAGALGEIGDRAVEPLIKALKDE--DPYVRMAAAYALGKIG------DERAVEPLIKALKDE---DGYVRRAAAYALGKIGDERAVEPLIKALK--DEDENVRLAAAQALG-AVEPLIKALKDEDRYVRLTAARALGKIGGERVRAAMEKLAET | |||||||||||||
8 | 4xl5C | 0.13 | 0.11 | 3.97 | 1.04 | PROSPECTOR2 | KVEMYIKNLQDDSPPVRVYAAFALGKIGERAVEPLIKALERAVEPLIKALKDEDGYVRTAAAEALGQIGDERAVEPLIKALKDED--------PWVRLTAARALGEIGDERVEPLIKALKDE--DPWVRLTAARALGQI------GDERAVEPLIKA---LKDEDASVRKAAAVALGQIGDERAVEPLIKALKDE--DEYV-----------RQRAASALGKIGGERVRAAMEKLAEPAPGFARKVAVNYTHK | |||||||||||||
9 | 4d4zA | 0.15 | 0.13 | 4.26 | 1.17 | FFAS-3D | -VDAIGQTLVDPKQPARFRALFTLRGGGPGAIAWISQAFD-----------DDSALLKHELAYCLGQMQDARAIPMLVDVLQDTRQEPM------VRHEAGEALGAIGDPELEILKQYSSDP--VIEVAETCQLAVRRLEWLQQHGNAGGEEAALALAEGLHCGSALFRHEVGYVLGQLQHEAAVPQLAAALARCTENPMV-----------RHECAEALGAARPACLAALQA-----HADDALDMYEH---- | |||||||||||||
10 | 5nr4A | 0.08 | 0.06 | 2.38 | 1.17 | FFAS-3D | SMEYFCAQVQQKDVGGRLQVGQELLLYLGGRLGKTVDALTGWVG-------SSNYRVSLMGLEILSAFVDAMVIVALIDRMGDAKDKVRDE----AQTLILKLMDQVAPPMYEQLASGFKHK--NFRSREGVCLCLIETLNIFGAQPLVISKLIPHLCILFGDSNSQVRDAAILAIVEI-YRHVGEKVRMDLYKRGIPPAR-----------LEMIFAKFDE------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |