>PF06664 (299 residues) KCDEIIVLHLGYLNYTQYQINISFHNLSDLKYKIKEVNFTWKMYNSSFSQVEIWFRFVFV VLTFMVTCLFAHSLRKFSMRDWGIEQKWMSILLPLLLLYNDPFFPLSFLVNSWFPGMLDD LFQSLFLCALLLFWLCVYHGIRVQGERKCLTFYMPKLFIVGLLWLSAVTLGIWQTVNELH DPTYQYKVDTGNFQGMKIFFVVVAALYILYLVFLIVRACSELKNMPYVDLRLKFLTALTF VILIISIVILYLRFGSKVLQDNFVAELSTHYQNSAEFLSFYGLLNFYLYTLAFVYSPSK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | KCDEIIVLHLGYLNYTQYQINISFHNLSDLKYKIKEVNFTWKMYNSSFSQVEIWFRFVFVVLTFMVTCLFAHSLRKFSMRDWGIEQKWMSILLPLLLLYNDPFFPLSFLVNSWFPGMLDDLFQSLFLCALLLFWLCVYHGIRVQGERKCLTFYMPKLFIVGLLWLSAVTLGIWQTVNELHDPTYQYKVDTGNFQGMKIFFVVVAALYILYLVFLIVRACSELKNMPYVDLRLKFLTALTFVILIISIVILYLRFGSKVLQDNFVAELSTHYQNSAEFLSFYGLLNFYLYTLAFVYSPSK | |||||||||||||||||||
1 | 5wb1A1 | 0.08 | 0.07 | 2.85 | 1.41 | SPARKS-K | -------------------------------------PCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITW-RRRIQCSGDVYFINLAAADLLFVLPLWMQYLLLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRP--VKQACLFSIFWWIFAVIIAIPHFMVVTKKQCMTDYVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSCEFERSLKRALILTESLAFCHCCLNPLLYVFVG | |||||||||||||
2 | 5ee7A1 | 0.10 | 0.07 | 2.74 | 1.48 | FFAS-3D | -----------------------------------------------YSSFQVMYTVSLSLAALLLALAILGGLSKLH----CTANAIHANLFLSFVLKASAVLFIDGLLRTVACRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLRSFFSLYL----GIGWGAPALFVVPWAVVKCLFENVQCWTNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHTDYAFRLAKSTLTLIPLLGVHFVVFAF--------------VTDEHRSAKLFFDLALSLLVAVLYCF----- | |||||||||||||
3 | 3rkoB | 0.10 | 0.09 | 3.19 | 1.39 | CNFpred | -------------------------------------NIGFNLVL---DGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWELCSYLLIGAMKAFVVTRVGDVFLAFALFILYNE----LGTLNFREMV-MLMWATLMLLGGAVGKSAQL---PLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC | |||||||||||||
4 | 5t1aA1 | 0.11 | 0.09 | 3.29 | 1.23 | Neff-PPAS | --------------------------------------------KQIGAQLLPPLYSLVFIFGFVGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANETGLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTKQKEDSVYVCGPYFPRGWNNFHTIMRNILGLVLPLLIMVICYSGISRASREKKAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLGMTHCCINPIIYAFVGEK | |||||||||||||
5 | 5wb1A1 | 0.10 | 0.09 | 3.20 | 1.13 | PROSPECTOR2 | PCV--------------------------------------------FTDVLNQSKPVTLFLYGVVFLFLVIFTITWRRRIQCSGDVYFINLAAALFVCTLPLWMQYLLDHNSLTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYRISRIVAVSQSRHKG-RIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLLVPRG | |||||||||||||
6 | 6me6A2 | 0.10 | 0.09 | 3.21 | 1.39 | SPARKS-K | ----------------------------------------DGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRRNAGNLFLVSLALANLVVAFYPYPLILVAIFYDGWHCKASAFVMGLSVIGSVWNITAIAIDRYLYIHRIYRRWHTPLHICLIWLLTVVALLPNFFVSLEYDPRIYSCTFIQTASTQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLQARLKPSDLRSFLTMFVVFVIFAICFAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNVYGLLDQNFRREYK | |||||||||||||
7 | 4or2A2 | 0.14 | 0.10 | 3.56 | 1.42 | FFAS-3D | --------------------------------------------SNIESIIAIAFSCLGILVTLFVTLIFVLVVKSSS-------RELCYIILAGIFLG---YVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIRKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYF---------------GSNYKIITTCFAVSLSVTV-ALGCMFTP-- | |||||||||||||
8 | 4he8F | 0.12 | 0.10 | 3.45 | 1.32 | CNFpred | -------------------------------------PFSLLLD-----NLSGFMLLIVTGVGFLIHVYAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGARKAFIVNRIGDLGFMLGMAILW---YGTLSISELK-LLALAGLLLFLGAVGKSAQI---PLMVWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAL | |||||||||||||
9 | 4xt1A | 0.09 | 0.08 | 2.97 | 1.16 | Neff-PPAS | ---------------------------DEDATPCV----FTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDSVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTK | |||||||||||||
10 | 3dqbA | 0.06 | 0.06 | 2.58 | 1.11 | PROSPECTOR2 | -------------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVAFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYMVTTLCCGKN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |