>PF06524 (289 residues) MPKKKTGQRKKAEKQKLRQKAIRGNAARVNLGDHPCNAVMECDKCSRKQKNRAFCYFCSA VQRLPVCAKCGKMKCMMKTGDCVVKHSGQYTTGLGMVGAICDYCEAWVCHGRQCLTSHAC TCPLQDATCIECERYVWEHGGRIFKCSFCDSFLCEDDQFEHQASCQILEAETLKCVSCNR LGHHSCLRCKACYCDDHVRRKGFKYERNQPMPCPKCGFETQQTKDLSMSTRHHNYGRQQI RDDDDDDYGSSSGYGGGGYGYYGAGGGAGDVDEDDEEEDDDDEDDDDDE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MPKKKTGQRKKAEKQKLRQKAIRGNAARVNLGDHPCNAVMECDKCSRKQKNRAFCYFCSAVQRLPVCAKCGKMKCMMKTGDCVVKHSGQYTTGLGMVGAICDYCEAWVCHGRQCLTSHACTCPLQDATCIECERYVWEHGGRIFKCSFCDSFLCEDDQFEHQASCQILEAETLKCVSCNRLGHHSCLRCKACYCDDHVRRKGFKYERNQPMPCPKCGFETQQTKDLSMSTRHHNYGRQQIRDDDDDDYGSSSGYGGGGYGYYGAGGGAGDVDEDDEEEDDDDEDDDDDE | |||||||||||||||||||
1 | 5v3jE | 0.15 | 0.13 | 4.31 | 2.13 | MUSTER | ----------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPQLSLHHRVHTDEKCFECKECGKAFMRPSH---LLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGE-TPYKCKECGKGFPYKCKECGKSFCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--------------------------- | |||||||||||||
2 | 5v3jE | 0.15 | 0.13 | 4.28 | 3.11 | Neff-PPAS | ----------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKSNAQLSLHHRVHTDEKCFECKECGK---AFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGET-PYKCKECGKDKPYKCKECGKSFCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSE------------------------------------ | |||||||||||||
3 | 6qixA | 0.16 | 0.15 | 4.85 | 0.96 | SPARKS-K | GDWKPWTDCLWYPPQHMYSKLSHACGMHAHVMDLPCSFKFRCRRRPNTEG-------CYPL--------DGEVECHDHSDICTLPHLGCGYAFINEKLKQCFTRYVRLGYRKMFESIPKKHCIEKDGMCKCCCYEPNESGTECIKCSECLWFPLKNIVSHVYDHCHVKEPDGYEPHSVAPANVHIPEKCGFCSFRVKCMKRPLKLGKKGKDDCPTCG------DICTLDKISCAFPRVMKEKIWDDKEKHMPHWKRDGYAKMLMQLPYSNCKEVGDKCKCCCHPYEPNK | |||||||||||||
4 | 5v3jE | 0.18 | 0.14 | 4.52 | 0.46 | FFAS-3D | ---KECGKAFHTPSQLSHHQKLHV-------GEKP----YKCQECGKAFPSNAQLSLHHRVHKCFECKECGKA---FMRPSHLLRHQRIHTGEKPH---KCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCAGEKPHKCKECGKGFISDSHLLRHQSVHTGETP-YKCKECGKGKPYKCKECGKSFTTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGK------------------------------------------- | |||||||||||||
5 | 4gndA | 0.19 | 0.06 | 1.79 | 0.49 | HHpred | --------------------------------------------------------------------------------------------------------------------------QMHEDYCFQCGD-----GGELVMCDDCPKAY-------HLL-CTQPPYGKWECDECSSAAVSFCEFCPHSFCKDHEKGALVPSALEGRLCCSEHDPMAP-------------------------------------------------------------------- | |||||||||||||
6 | 5v3gD | 0.16 | 0.09 | 3.01 | 1.59 | MUSTER | ---------------------------------PGSEKPYVCRECGRGFSHLLRHQRTHTGEKPYVCRECGRGFRDKSH---LLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTH--------------------TGEKPYVCRECGRGFSWQSVLLRHQRTHTGE-KPYVCRECGRGFRD----------KSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT------------------------------------------------------- | |||||||||||||
7 | 4gxpA | 0.15 | 0.03 | 1.05 | 0.65 | CNFpred | --------------------------------------------------HNILVAHGRAVKVFRETVKDGKIGIVLN-GDFTYPWDAADPADKEAAERRLEFFTAWFADP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 2xjyA | 0.22 | 0.08 | 2.63 | 0.39 | HHsearch-2 | --------------------------------------------------------------SLLTCGGCQQNI----GDRYFLKAI------------------DQYWH-EDCLSCDLCGCRLGEVG-----RRLYYKLGRKLLCASCDKRIRAYEMT-MRVKDKVYHLECFKCAACQKHGDRYLLINSDIVCEQDTKING--------------------------------------------------------------------------------------- | |||||||||||||
9 | 5v3gD | 0.16 | 0.09 | 3.10 | 2.15 | Neff-PPAS | ------GSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRDKSHLLSHQRTHTGEKPYVCRECGRGFRD-----------------------------------KSNLLSHQRTHT----------------GEKPYVCRECGRGFSWQSVLLRHQRTHTGE-KPYVCRECG----------RGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT------------------------------------------------------- | |||||||||||||
10 | 5lqwX1 | 0.32 | 0.03 | 0.94 | 0.58 | HHsearch | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSLISVSLNNEEEEEEEEDDDDEKEEEE- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |