>PF06454 (272 residues) VSDWWDEINESTQWQDGIFYALCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNF IVNGVRAIVFGFHKQVFVLHPKVLTLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPTD KLRIFYMSINGVIYFIQVCIWVYLWIDDNSVVEFIGKIFIAVVSFIAALGFLLYGGRLFF MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVVLSAFDSDASLDVLDHPVLNLIY YMVVEILPSALVLYILRKLPPKRISAQYHPIR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | VSDWWDEINESTQWQDGIFYALCAAYALVSSVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVRAIVFGFHKQVFVLHPKVLTLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPTDKLRIFYMSINGVIYFIQVCIWVYLWIDDNSVVEFIGKIFIAVVSFIAALGFLLYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVVLSAFDSDASLDVLDHPVLNLIYYMVVEILPSALVLYILRKLPPKRISAQYHPIR | |||||||||||||||||||
1 | 4xt1A | 0.09 | 0.09 | 3.47 | 1.28 | SPARKS-K | DYDEDATPCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITW-RRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAV--SQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLLLKWISSSCEFERSLKRALILTESLACCLNPLLYVFVGTKFRQELHCLLA | |||||||||||||
2 | 3dqbA | 0.12 | 0.11 | 3.78 | 1.46 | FFAS-3D | ----------AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLR-TPLNYILLNLAVADLFMVFGGFTTTLYTSLHPTGCNLEGFFATLGGEIALWSLVVLAYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWTNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLIYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNP---VIYIFRN-------------- | |||||||||||||
3 | 4l6rA2 | 0.14 | 0.13 | 4.42 | 1.07 | MUSTER | ------EVQKEVAKMYSSFQVMYTVGYSLSLGALLLALAILGGLSKLH-CTRNAIHANLFASFVLKASSVLVIDGLLSDGAVAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLLPERSFFSLYLGIGWGAPMLFVVPWAVVKCNDNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHT---DYKFRLAKSTLTLIPLLGVHEVVFAF----VTDEHAQGTLRSAKLFFDLFLSSFQGLLVAVLYCFLNKERLGKVLWEER | |||||||||||||
4 | 3rkoB | 0.11 | 0.10 | 3.55 | 1.29 | CNFpred | ---------------DGLSLTMLSVVTGVGFLIHMYASWYMR-----EEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIAMKAFVVGDVFLAFALFILYNELG--TLNFREMVMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAAAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC------------- | |||||||||||||
5 | 4mbsA1 | 0.10 | 0.10 | 3.65 | 1.26 | Neff-PPAS | ------QKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINYKRLK-SMTDIYLLNLAISDLFFLLTVPFWAHYAAAQCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMKEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ | |||||||||||||
6 | 5wb1A1 | 0.09 | 0.08 | 3.12 | 1.11 | PROSPECTOR2 | PC-------VFTDVLNQSKPVTLFLYGVVFLFGSIFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDHASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAV--SQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFLHCLLAEFRLVPR--------G | |||||||||||||
7 | 5wb1A1 | 0.07 | 0.07 | 2.85 | 1.25 | SPARKS-K | -------PCVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRQCSGDVYFINLAAADLLFVCTLPLWMQYLLDHNSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYRPVKQACLFSIFWWIFAVIIAIPHFMVLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAV--SQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLLKWISSSCRSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE | |||||||||||||
8 | 3capA | 0.10 | 0.09 | 3.28 | 1.43 | FFAS-3D | ----------AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHFGPTGCNLEGFFATLGGEIALWSLVVLYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLIYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNP---VIYIFRN-------------- | |||||||||||||
9 | 5lweA | 0.10 | 0.09 | 3.42 | 1.07 | MUSTER | -----------RQFASHFLPPLYWLVFIVGALGNSLVILVYWYCARA-KTATDMFLLNLAIADLLFLVTLPFWAIATFM--KVVNSMYKMNFYSCVLLIMCICVDRYIAIAQRAHTWREKRLLYSKMVCFTIWVLAAALCIPEILYCTTKLKSAVLALKVILGFFLPFVVMACCYTIIIHTLIQA--KKSSKHKALKATITVLTVFVLSQFPYNCILLVQTIDAYAMFISNAIDICFQVTQAIAFFHSCLNPVLYVFVGERKNLGAISQAAA | |||||||||||||
10 | 3rkoC | 0.09 | 0.08 | 2.93 | 1.25 | CNFpred | -----------GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMML-GKTRITAATKFFIYTQASGLVMLIAILALVFVHYNGVWTFNYEELLNTP-VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA---YGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA-----AQTDIKRLIAYTSVSHMGFVLIAIYTGSQL--------AYQGAVIQMIAHGLSAAGLFILCGQLYERI------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |