Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KMILLVHWLLTTWGCLVFLGPYAWANFTILALGVWAVAQRDSIDAISMFLIGLAVTIFLDIVHISIFYPRQNLTDTGRFGAGMAILSLLLKPFSCCLVYHMYRERGGELQLHAGFLGPSQDRSAYQTIDSPEAPSDPFSGPEGKN |
1 | 5xtcr2 | 0.15 | 0.15 | 5.10 | 0.93 | SPARKS-K | | LVLSLWGMIMTSSICLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNQGLQTLLPLMAFWWLLASLANLINLLGELSVLVTTFSWSNITLLLTGLNMLVTALYSLYMFTTTQWGSLTHHINNMKP |
2 | 4jq6A | 0.08 | 0.06 | 2.21 | 0.93 | FFAS-3D | | --LITVPLQIIEFYLIIAVFKLLIASLVMLIGGFIGEAGLGDVVVWWIVGMVTVGWAIYPIGYAWGYF--GDGLNEDALNIVYNLADLINKAAFGLAIWAAAMKDKET------------------------------------- |
3 | 6nbqE | 0.11 | 0.08 | 2.72 | 0.23 | HHpred | | ------------------LTYVLILAALLFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLIGFANYLDGQ-QIKGQVFAVFVITVAAAEAAVGLAIILAIYRNRDTVDMEKFNLL----------------------------- |
4 | 6ftg51 | 0.10 | 0.10 | 3.61 | 0.92 | MUSTER | | IYWAAKCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLIIASVSEHQPTTWSSYYFD |
5 | 3rkoC | 0.13 | 0.09 | 3.10 | 0.99 | CNFpred | | ILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYG--QTDIKRLIAYTSVSHMGFVLIAIYTGSQ-----LAYQGAVIQMIAHGLSAAGLFILCGQLYERI--------------------------------------- |
6 | 5tj5A | 0.08 | 0.07 | 2.70 | 0.68 | HHsearch-2 | | AGLPTIVTFPFMFAIM-F-----GHGFLMTLAALSLVLNEKKINIFDIILLMGVFSMYTGFLYN---GTENANSYKMKLSILMGFIHMTYSYFFSL-----ANHL-DIIGFIPWAV--------DWVKGKPAPGINMFPGTIDDE |
7 | 5d0yA | 0.08 | 0.06 | 2.21 | 0.89 | Neff-PPAS | | WWGFAGGALSDLVSSAIFGNLGFTLTAALESMIYGFFLYKKPIQIWRVIASVICVTVICYIGLNTLWVSMLGGTNFMVALSSRILKEMITPWIHMVVVWFILEGL---------------------------------------- |
8 | 2mgyA | 0.11 | 0.09 | 3.26 | 0.62 | HHsearch | | PAVSLGGFEGLRWAGLSWPPRWTLAGTLYSAMGYYIVWKELGFEDAMVPLGLYTGQLALNWAWPPIFFGAR----QMGWALADLL----LVSGVATATTLAWHRVSPPAARYPYVWRDNSGRRGGSRLAE--------------- |
9 | 6nbqE | 0.11 | 0.08 | 2.72 | 1.06 | SP3 | | ----------------MQLTYVLILAALLFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLIGFANYLDGQQIKG-QVFAVFVITVAAAEAAVGLAIILAIYRNRDTKFNLLKW------------------------------- |
10 | 4uavA | 0.08 | 0.08 | 3.05 | 0.64 | PROSPECTOR2 | | TKDGHRISFNDTFKERDLNVTWDVDLYGELMTAYFNKVAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALAVSAIVSCLLGAIYNLAAETLGVDPSTKSGYTADEDFENADAVFDCIGDPPEERLRKQFVS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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