>PF06181 (290 residues) TLEWLGLLFRWLHVLFAIMWVGNSFHFNWMDIHMKKPKKAKPGVLGELWMLHGGSFFHLE KKEVNPKQIPGLIHWFKYESYFTWVTGFLLLSIVYYFNGGIYLLDPSVSDLTNHQAIHLG AGTLLFGWLFYDQLWRRKFAQNNPAFGSLITFVAIIAATYFLSTQLSGRAAFLHIGALMA TIMTGNVFFHIIPNQKKMMAMAYSGQKPDPSIGARAKMRSVHNNYFTFPVLFMMLSNHSP STFSTDLKWLVLLLLILGSVAIKHFLNIRENFKSWKIASLASGFITVALI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | TLEWLGLLFRWLHVLFAIMWVGNSFHFNWMDIHMKKPKKAKPGVLGELWMLHGGSFFHLEKKEVNPKQIPGLIHWFKYESYFTWVTGFLLLSIVYYFNGGIYLLDPSVSDLTNHQAIHLGAGTLLFGWLFYDQLWRRKFAQNNPAFGSLITFVAIIAATYFLSTQLSGRAAFLHIGALMATIMTGNVFFHIIPNQKKMMAMAYSGQKPDPSIGARAKMRSVHNNYFTFPVLFMMLSNHSPSTFSTDLKWLVLLLLILGSVAIKHFLNIRENFKSWKIASLASGFITVALI | |||||||||||||||||||
1 | 6cc4A | 0.04 | 0.04 | 1.98 | 1.28 | SPARKS-K | ADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFS-------IPAFAPTLLNISMIGFAAPYFNPPV---LALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFHVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQIKTPVKIAIVTLILTQLMNLAFIGPLK----HAGLSLSIGLAACLN | |||||||||||||
2 | 3rkoB | 0.10 | 0.09 | 3.28 | 1.31 | CNFpred | --GYSRFFAYTNLFIASMVVLVLADNLLLMYL---------------GWEGVGLCSYLLIGFY-----DPKNGAAAMKAFVVTRVGDVFLAFALFILYGTLNFREM-GNNMLMWATLMLLGGAVGKSAQLQTWLADAMAG-PTPVSALIHAATMVTAGVYLIARTHGLFVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYS--------TMSQIGYMFLALGVQAWDAAIFHLMTH----------AFFKALLFLASGSVILACHHEQNIFIPLVYLCFLVGGAALSAL | |||||||||||||
3 | 4od4A | 0.13 | 0.11 | 3.82 | 1.08 | Neff-PPAS | TLADAILMAAAVVGLRMAGMAYNNIADLDIDRLNPRTAKRP---------------------------LVVGAVSLREAWALVAAGSAIYFASAALLN----------------TYALLLSPLVLAIALTYPHAKRLHPLPHLHLGIVLGSVVFGGAVAASGDEASSLGEVLRSVPWLYVAAVSLWVAGFDTIYSIMDIDFDRSHG--LGSIPALLGPKGALAASLAMHAAAVALFIAGVEAYGLGAIATVSTALTALVIILVQAMAWLGRVKESFNLNLAVPIIIGAGI | |||||||||||||
4 | 6eznF1 | 0.11 | 0.11 | 3.84 | 1.07 | PROSPECTOR2 | SCVLSVFQTILKLVIFVAIFGAAIFNYRATKYLVNNSFYKFLNWFDDRTWYPLGRVTG---GTLYPNWLGLPIDIRNVCVLFAPLFSGVTAWATYESRSVAGSYDNEAIA---------ITLLMVTFMFWIKAQKTGSIMHATCAAYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVAAALGVFGLIQIVAFGDFVKGQISTAKFKVIMQPVSWPAFFFDFPAGVFLLFLDLKDEMVRLMLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFI | |||||||||||||
5 | 6elhA | 0.09 | 0.08 | 3.13 | 1.26 | SPARKS-K | MSDWFPALTRTWHIQSAIFWIATGFLTAGLFLAPIVNGGKD------------------------PKFQRAGVNFLYIALFIVVGGSYAGNFFALTHILPFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKNLLAIFVASMVGVGYAPGLFYGEIAVMEYWRWWVVHLWVEGFFEVFATAAFAFVFYNMGFVRR-----STATASTLAAAAIFMLGGVPGTLHHL-YFSGSTSASMAIGACFSALEVVPLAYEHWSYQKRLRWPLMCFVAVAFWNM | |||||||||||||
6 | 5ezmA1 | 0.11 | 0.10 | 3.60 | 0.74 | FFAS-3D | --------TGWVVLF-----VAVALVVWFVSLDMRHLVGPDEGRYAEISMFASGDWVTIRYNALKYFEKPPFHMWVTVVGLAVALSGLLGIGVSMMAARRWF---------GARAAAFTGLALLAAPMWSVAA-------HFNTLDMTLAGVMSCVLAFMLMGQHPDRRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPEFPGSVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVF | |||||||||||||
7 | 4czbA | 0.11 | 0.08 | 3.01 | 0.29 | HHpred | -----------ITFLITLLISGFIFNM-VLNLPYTAATD--PATLIP-----------VFSRVRTNP---EVAITLEAESIFNDPLGIVSTSVILGLFGLF---SSSNPLIDLITLAGGIVVGLLLAKIYEKIIIHCD--FHEY-V--APLVLGGAMLLLYVGDDYGFS---GYMAVAIMGLYLGDALFR-------------A--DDIDY--KYIVSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPFLGLIGSKHSFKLYFAL--------- | |||||||||||||
8 | 4tq3A | 0.12 | 0.10 | 3.65 | 0.98 | MUSTER | -SKYLRLL---PVAWLCFLLPYAVGFGFGI----TPNASLQHAVLG-FAFWMAFSLYRLHDGLNLSMPLVTGEISVREAWLYCIAFLALSLATAAAIN---------------EKFFLAMLGANIIGYVYSAPFKAWPVM---DVICNALAAVLAFYAGLSIGGA-------VPIAIYPAAFFLAATFYIP-TAVSDYEFDKKAGLK--VFFPERALKSLYPLSAITVILWAYVFL-----MAERIEIKVISPLIIAYTLIYTFIINSRWDGEKLNLILTPFGIISALFI | |||||||||||||
9 | 4he8F | 0.06 | 0.05 | 2.21 | 1.28 | CNFpred | ----------LLALAGLLLFLGAVGKSAQIP--------------LMVWLPDA--------------------MAGPTPVSALIHAATMVTAGVYLIARSSFLYSV----LPDVSYAIAVVGLLTAAYGALSAFGQTD---IKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHALG-RKMGGLWKHLPQTRWHALIGALALGGSGFWSKDAILAATLTYPFGGV-GFYVGALLVAVLTAMYAMRWFVLVFL-EAPPVMLWPNHLLALGSVL | |||||||||||||
10 | 6adqD | 0.12 | 0.03 | 1.23 | 0.89 | HHsearch-2 | ---------------------------------MSSTQDR-SQLDP-----------EVERHGVDVEDVPSAHMPIGVMHIGGLLSAAFLLVMMR-GNHVG----------HVEDWFLIGFAAVIVALVGRNWWLRRRGWIR---------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |