>PF06022 (280 residues) CGILISISNSISKKLDKNKNYQIVINESTLNRYCSGNSCDNDLDKINAGCLYLLDSFFKD SSVFRSYAKSNTNIVEYIIIWLSYMLNLKEQFGKTNLQYFYEIYIQGGDQYKNSITGVTG YNSYKDLIDNKIDLINMDMSIVPKLYDAFYTLCMMYLEFDEESRNCSKNSGRAKEFVEKY EYLKKNYSITKNSPYYKLLSTLSKDYDNFKKKCSDVSCKDIPPLQSIEKTEINVNLSEHS KLTSVQTSEDASSSSSITNNLFIVLSIFGAIAFFLGISYK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | CGILISISNSISKKLDKNKNYQIVINESTLNRYCSGNSCDNDLDKINAGCLYLLDSFFKDSSVFRSYAKSNTNIVEYIIIWLSYMLNLKEQFGKTNLQYFYEIYIQGGDQYKNSITGVTGYNSYKDLIDNKIDLINMDMSIVPKLYDAFYTLCMMYLEFDEESRNCSKNSGRAKEFVEKYEYLKKNYSITKNSPYYKLLSTLSKDYDNFKKKCSDVSCKDIPPLQSIEKTEINVNLSEHSKLTSVQTSEDASSSSSITNNLFIVLSIFGAIAFFLGISYK | |||||||||||||||||||
1 | 2pffB | 0.11 | 0.10 | 3.52 | 1.24 | HHsearch-2 | VLL-VPTASFFIASQLQ-EQ--F---NKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVE-----PSKVGQFDQVLNHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEQLVAITDDYFEELRDLYQTYHTLSELIRTTLDPDISCPLIGVIQLAHYVVTAKLLRSYLKSWESFFVSVRKAITVLFFIGV------RCYAYPNLPPSNLTQEQVQIPPQSAPSGLIPFSELPVSPFHSHLLVP------ASDLINKDLVK | |||||||||||||
2 | 1vt4I3 | 0.11 | 0.07 | 2.56 | 1.06 | HHsearch | ------------------------------------------------------------------------------EYALH-----------RSIVDHYN--IPKTFD---SDDLIPPYLDQYFYSHIGHHLKNEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS-ILNTLQQLKFYKPICD--NDPKYERLVNAILDFLPKI-EEN--LICSKYTDLLRIALMAEDEAIFEE-AHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- | |||||||||||||
3 | 5wtjA1 | 0.14 | 0.13 | 4.54 | 0.81 | SPARKS-K | ITFFASTNKIFSRENINNDENNYVLDKKIIIRDLDFDNKNNITNNFIRKFTKIGTNERNRIERDLQGTQDDYNKVINIIQNLK--ISDEEVSKALNLDVVFKNIITKINDIKISEENNNDIKYLLNLYRNNIETEKIVLNALIYVNKELYKKLILEDDLEENESK-NIFLQELKKTLNYYKNAQISASKGNNKAIKKYQKKVIECYIGYLRKNY----EELFDFSDFKNIQKDINDNKTYERITVKTSDKTIVINDSNAVINKIRNRFFATSVWLNTSEY | |||||||||||||
4 | 1zb1A | 0.09 | 0.08 | 3.16 | 0.79 | FFAS-3D | -DWKKGLSSYLKKSYGSSQWRTFYDEKDHLRNNANGELAPSSLSEQNLKYYSFLEHLYFEYSSAQKGLKYTQHTLAFIAVIFTQIARENINEDYKNSIANLTKAFSCFEYLSENFLNSPSVDLQSENTRFLANISSKQYTLISKLRATCNLFQKCHDFMKEEENRVGEAIAFLDFSMQQLISSLPFKTWVEFIDFDGFKETLEKKQKELIKDNDFIYHESVPAVVQVDSIKALDAIK-------------SPTWEKILEPYMQDVANKY-DSLYRGII-- | |||||||||||||
5 | 1vt4I3 | 0.12 | 0.05 | 1.90 | 0.40 | HHpred | --------------------------------------------ALHRSIVDHYN----IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPEFLDFRFLEQKIRHDST-AWNASGS--------------------ILNTLQ-QLKFYKPY------------ICDNDPKYERLVNAILDFLPKENLI--CSKYTDLLRIALAIFEEAHKQ-------------------------------------------------------------------- | |||||||||||||
6 | 5w53A | 0.10 | 0.10 | 3.66 | 0.95 | MUSTER | TNTTDNID-YFDISDESNYYLISQLRPDEFKRYASYHT---EIKRYEDIHKTKVNSLLNEASRAIGICNRAKNTVKGLINILENPQKFKTQRE--SYDVKLRQYEEKKEAFRGCLLN--KNRKNLDQIKKINNEIRDLLEQTNVYFDMIKIYLVDFKKMPYE--NYDTFIKQYKNSYLSGVDMIRKIKQIDNPVTINAIKFTQKEMGYIIDRFEYQKVKHIDQVTALSDGVKPKQVTKNRKEYYFNIGNYYSIFKFGKDSLNMLNKALIHKEKIVHNLLG | |||||||||||||
7 | 5w53A | 0.08 | 0.07 | 2.65 | 0.87 | CNFpred | IYFFDEFKRYASYHT----------EIKRYEDIH-----KTKVNSLLNEASRAIGICNRA----------KNTVKGLINILENPQKFKTQRE---SYDVKLRQYEEKKEAFRGCLLN---NRKNLDQIKKINNEIRDLLEKLK-TNVYFDMIKIYLVDFKKM--PYENYDTFIKQYKNSYLSGVDMIRK-DNPVTINAIKFTQKEMGYIIDRFEY-----------------HLQKVKHSIDQVTALSDGVKPKQVTKNRLKEYYFNIGNYYSIFKFGKD | |||||||||||||
8 | 1vt4I3 | 0.10 | 0.05 | 1.86 | 0.68 | HHsearch-2 | ------------------------------------------EYALHRSIVDHYNIP-KTF---DSDDLIPPYLDQYFYSHIGHHLKNIE-----------------------------------------------HPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS-GSILNTLQQLKFYKPYCD--NDPKYERLVNAILDFLPKI-EENL--ICSKYTDLLR--------------------------------------IALMAEDEAIFEEAHK | |||||||||||||
9 | 4z8nA | 0.11 | 0.10 | 3.51 | 0.97 | Neff-PPAS | ----SDILRYL-DFSNSSGQIISTVYPAEIKYYITYH--YEAKKNYDEAYNQSVNPLMSSIQNQINSCVPKKAALEKTIFVLEYPENHN--INLSNYEAKHNEYKQQLDAYKNCVQANSYTDRMSKFNEKIYSILNSDACETDTYEIMLEIYVERVKEV--NHNNYVNYLSTLKASLQLGVTLMLKVKQEDNNVTISAINFLQEEMLDIITIGEGKIIHGKENVLKLQNNNIPPQV----------------PLSTLKKLYFDSANFYATYKFSLKRADT | |||||||||||||
10 | 5zazA | 0.14 | 0.02 | 0.61 | 0.40 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVDESRESVAGPNIAAIVGGTVAGIVLIGILLWKAL- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |