>PF06008 (259 residues) LQGLSVSTGALEQIRHVEMQAKDLRNQLLGFRSAISSHGSKMDGLEKELSHLNQEFETLQ EKAQVNSRKAQTLYNNIDQTIQNAKELDMKIKNIIQNVHILLKQIARPGGEGMDLPVGDW SRELAEAQRMLRELRGRDFKKHLQEAEAQKMEAQLLLNRIRTWLESHQVENNGLLKNIRD SLNDYEAKLQDLRSVLQEAAAQGKQATGLNHENEGVLGAIQRQMKEMDSLKNDLTEHLAT ADASLLQTNSLLQRMDTSQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LQGLSVSTGALEQIRHVEMQAKDLRNQLLGFRSAISSHGSKMDGLEKELSHLNQEFETLQEKAQVNSRKAQTLYNNIDQTIQNAKELDMKIKNIIQNVHILLKQIARPGGEGMDLPVGDWSRELAEAQRMLRELRGRDFKKHLQEAEAQKMEAQLLLNRIRTWLESHQVENNGLLKNIRDSLNDYEAKLQDLRSVLQEAAAQGKQATGLNHENEGVLGAIQRQMKEMDSLKNDLTEHLATADASLLQTNSLLQRMDTSQ | |||||||||||||||||||
1 | 6ek7A1 | 0.11 | 0.10 | 3.80 | 1.03 | SPARKS-K | ----IFTKEDLINLKLYVRKGLSLQDEVEAYLKKIDVAGLEPKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTGNEIINLINITLRVKTLLGDITDKQLENITSADHEVASALKDILDDMKGDINRHQTENVRKKVSDYRITLTGLEPQVKTKYDLMEKSNQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAMINNALR-LTSFVNKFQQVITPWQSVGDSARQLVDIFDEAI | |||||||||||||
2 | 2tmaA | 0.09 | 0.08 | 3.11 | 1.83 | FFAS-3D | MDAIK------KKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELD------------RAQERLATALQKLEEAEKAESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDAYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAER-- | |||||||||||||
3 | 4uxvA | 0.09 | 0.07 | 2.84 | 0.82 | HHpred | ----QVLVHIDDLLTAAESSIEKILREISDLVTSEEKSREEIEQVRERYSKSRKNLLAYSHLYGELYDSLEKDLDEIW--YITARKVLLEQDRNLERLQSYIDDVPKLLAD----CKQTVPGQIAKLKDGYGEMKEKGYKLEHIQLDKELENLSNQLKRAEHVM-TEL-----DIDEASAILQLIDENIQSVYQQLEGAGQSVLSK---MPELIIAQQAFEKRLDEIGKLLSSVKDKLDAE------------------ | |||||||||||||
4 | 5nnvA | 0.12 | 0.11 | 3.81 | 1.31 | MUSTER | ---------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETL--------QAEVKQLRAQVKEKQQ----------LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES-SSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL- | |||||||||||||
5 | 5j1iA | 0.09 | 0.08 | 3.11 | 1.03 | CNFpred | ----------ARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVL-AAPTLRSELELTLGKL----EQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQ--AVPATLPELEATKASLKKLRAQAEA--QQPTFDALRDELRGAQEVGERLQQRHG-EVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQA-SQAVREQLRQEQALLEEIERHGEKVEECQ | |||||||||||||
6 | 4uxvA | 0.14 | 0.14 | 4.58 | 1.51 | HHsearch-2 | ISDLVTSEKSREEIEQVRERYSKSRKNLLAYSH---LYGELYDSLEKDLDEIW------YIT-------ARKVLLEQDRNLERLQSYIDDVPKLLADCKQVIAKLKDYKEKGYKLEHIQLDKELENLSNQLKRAEHVMTELDIDEASAILQLIDENIQSVYQQL-EGEVEAGQSVLSKMPELIIAYDKLKEEKEHTKAETELVQALDEIGASIEKQIEEVKKEHAEYRENLQALRKEELQARETLSNLKKTISETRLLK | |||||||||||||
7 | 5nnvA | 0.13 | 0.11 | 3.91 | 1.70 | Neff-PPAS | ---KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ-------------------------LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSE-SSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL- | |||||||||||||
8 | 4uxvA | 0.12 | 0.12 | 4.22 | 1.94 | HHsearch | KKANQVLVHIDDLLTAAESSIEKILREISDLVTSEEKSREEIEQVRERYSKSRELYDSLEKDLDEIWITARKVLLEQDRNLERLQSYIDDVPKLLADCKQVIAKLKDYKEKGYKLEHIQLDKELENLSNQLKRAEHVMTELDIDEASAILQLIDENIQSVYQQL-EGEVEAGQSVLSKMPELIIAYDKLKEEKEHTKAETELVKESYRLLDEIGKLVASIEKQIEEVKKEHAEYRENLQALRKEELQARETLSTISET- | |||||||||||||
9 | 2yfaA | 0.12 | 0.11 | 3.82 | 1.29 | PROSPECTOR2 | -------GSHMGDIGQLNKDLTDLRIARLQYMIA-NGDDTAAANTLAKLDAFSKQQAYLATTFK--SPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSS-----------AIRADQAMDALSQEVMARPEDSVRLAQYQLISKARQQLLQVRIDVRGIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFR----DAVANITTSRAEMTVQGADIVKRSDALYQIQLER | |||||||||||||
10 | 4uxvA | 0.18 | 0.15 | 5.04 | 0.59 | SAM | ISDLVTSEKSREEIEQVRERYSKSRKNLLAYSHL---YGELYDSLEKDLDEIW-------------YITARKVLLEQDRNLERLQSYIDDVPKLLADCKQVPGQIAKMKEKGYKLEHIQLDKELENLSNQLKRAEHVMTELDIDEASAILQLIDENIQSVYQQL-EGEVEAGQSVLSKMPELIIAYDKLKEEKEHTKAETELVKESYRLTAGELGKQQAFEKRLDEIGKLLSSVKDKLDAEH----------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |