>PF05868 (249 residues) MASLLLLVLAAAVTAQLNIVPSTHPEVCVLYADDHQADANKFNGNFTQIFHSYNSITLSF MSYSSSSYDVIDIISKYDLSSCNILAIDVFNASMDFNVFLQSTNNCSKYNANKVHHVKLP RGEEWFSYSKNLKFCPLSDSLIGMYCDTQLSDTYFEISTGGTYEVTDIPEFTQMGYTFHS SEEFYLCHRISSEAWLNYHLFYRDYDVSGVISKQVNWGNVWSGFKTFAQVLYKILDLFFN SKRNVEPRA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MASLLLLVLAAAVTAQLNIVPSTHPEVCVLYADDHQADANKFNGNFTQIFHSYNSITLSFMSYSSSSYDVIDIISKYDLSSCNILAIDVFNASMDFNVFLQSTNNCSKYNANKVHHVKLPRGEEWFSYSKNLKFCPLSDSLIGMYCDTQLSDTYFEISTGGTYEVTDIPEFTQMGYTFHSSEEFYLCHRISSEAWLNYHLFYRDYDVSGVISKQVNWGNVWSGFKTFAQVLYKILDLFFNSKRNVEPRA | |||||||||||||||||||
1 | 3gztQ | 0.15 | 0.14 | 4.72 | 3.00 | SPARKS-K | ---PITGSMDTAYANSTQEETFLTSTLCLYYPT---EAATEINDN--SWKDTLSQLFLTKGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTTCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
2 | 3gztQ | 0.16 | 0.14 | 4.67 | 2.30 | FFAS-3D | --------------------TFLTSTLCLYYPTEAATEDNSWKDTLSQLFLTKGWPTVYFKEYTDIASFSVDPQLYCDYNV--VLMKYDATLQLDLADLILNEWLCNPMDITLYYYQQTDEANKWISMGCTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDVNHKLDVTTATCTIRNCKKLGPRENVAVIQVTADPTTAPQTERRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
3 | 3gztQ | 0.16 | 0.14 | 4.55 | 7.53 | HHpred | -----------------PITGSLTSTLCLYYPTEAATEI---ND--NSWKDTLSQLFLTTSVYF-KEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTATCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
4 | 3gztQ | 0.17 | 0.14 | 4.78 | 2.16 | MUSTER | -----------------PITGSLTSTLCLYYPTEAATEINSWKDTLSQLFLTKGWPTGSVYFKE---YTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTTCTIRNCKKLG--PRENVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
5 | 3fmgA | 0.16 | 0.13 | 4.29 | 2.56 | CNFpred | ------------------------STLCLYYPTEAATEIND-----NSWKDTLSQLFLT-GSVYFKEYTDIASFSVDPQLYCDYNVVLMK-DMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGCTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTTCTIRNCKKLGP--RENVAVIQVGG-PQTERMMRINWKKWWQVFYTVVDYVNQIIQAMS---------- | |||||||||||||
6 | 3gztQ | 0.16 | 0.14 | 4.55 | 5.66 | HHsearch-2 | -----------------PITGSLTSTLCLYYPTEAATEI---ND--NSWKDTLSQLFLTTSVYF-KEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTATCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
7 | 3gztQ | 0.15 | 0.13 | 4.47 | 3.33 | Neff-PPAS | ---------------STQEETFLTSTLCLYYPTEAATEINDWKDTLSQLFLTKGWPTVYFKEYTDIASFSVDPQLYCDYNV--VLMKYDALDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDVNHKLDVTTATCTIRNCKKLGPRENVAVIQVGGSDAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
8 | 3gztQ | 0.16 | 0.14 | 4.55 | 8.63 | HHsearch | -----------------PITGSLTSTLCLYYPTEAATEI---ND--NSWKDTLSQLFLTTSVYF-KEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTATCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
9 | 3fmgA | 0.15 | 0.13 | 4.31 | 2.11 | PROSPECTOR2 | -----------------------TSTLCLYYPTEAATEI-----NDNSWKDTLSQLFLTTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTATCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
10 | 3gztQ | 0.15 | 0.13 | 4.31 | 2.59 | SAM | -----------------------TSTLCLYYPTEAATEI---ND--NSWKDTLSQLFLTTSVYF-KEYTDIASFSVDPQLYCDYNVVLMKYDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSTIKVCPLNTQTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTATCTIRNCKKLGPRE--NVAVIQVGTAPQTERMMRINWKKWWQVFYTVVDYVNQIIQAMSK--------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |