>PF05742 (243 residues) MCLILFANNVHPKYKLILVANRDEFYKRPTRPAQWWEDKSDVLAGKDLEGGGTWMGISKS GRIAALTNYRKLPVNEKYNSTRGKLVTDFLDESISRTDYLKKLEDSSNDYDGYNLVFGNA DQLTYYSNKGGEESDVEPGIHGLSNALLDTPWPKVKLGKEALSTIVNESEDIVPDRLFEI LHNTDLAPDEELPDTGIGIEYERVLSAAFINPISIGSPDYGTRLSTVILIDKENKVHFEE RAF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MCLILFANNVHPKYKLILVANRDEFYKRPTRPAQWWEDKSDVLAGKDLEGGGTWMGISKSGRIAALTNYRKLPVNEKYNSTRGKLVTDFLDESISRTDYLKKLEDSSNDYDGYNLVFGNADQLTYYSNKGGEESDVEPGIHGLSNALLDTPWPKVKLGKEALSTIVNESEDIVPDRLFEILHNTDLAPDEELPDTGIGIEYERVLSAAFINPISIGSPDYGTRLSTVILIDKENKVHFEERAF | |||||||||||||||||||
1 | 3gvzA | 0.14 | 0.12 | 4.21 | 2.20 | SPARKS-K | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLLLHPEHGYAYLGLYADNGPGIKAGVNQKGLAVVAAEASSLPRALRG------VLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLVEIGQHGRRLIRQQSGTLAHTNHYADTSLPSSQARLERIRFLLDQHPAHTLSEFERLSRDRHDGP----------------DNSLWRSGREH------TLAGWRIALPAPPRLQLTLANP | |||||||||||||
2 | 3gvzA | 0.15 | 0.14 | 4.54 | 1.49 | FFAS-3D | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHEHGYAYLGLYADNGPGIKAGVNQKGLAVVAAEASSLPRALRG------VLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLQVEIGQHGRYRLIQSGTLAHTNHYADTIGPSSQARLERIRFLLDQHPAHTLSEFERLSRDRHDGPDNSLWRSG----------------------REHTLAGWRIALPAGAPPRLRDGDY | |||||||||||||
3 | 3gvzA | 0.13 | 0.12 | 3.98 | 1.83 | HHpred | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHPHGYAYLGLYADSEPGIKAGVNQKGLAVVAAEASSLPR-----ALR-GVLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLVEIGQHGYRLIRQQSGTLAHTNHYADTSLLDGQARLERIRFLLDQHPAHTLSEFERLSRDRHDGP----------------DNSLWR-----SG-REHTLAGWRIALPAGARLQLTLA-- | |||||||||||||
4 | 3gvzA | 0.15 | 0.13 | 4.32 | 1.92 | MUSTER | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHEHGYAYLGLYADNGPGIKAGVNQKGLAVVAAEASSLPRAL------RGVLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLQVEIGQHGRLIRQQSGTLAHTNHYADTSLPSSQARLERIRFLLDQHPAHTLSEFERLSRDRHDGPD----------------NSLWRSG------REHTLAGWRIALPAGAPPRLQLTLA | |||||||||||||
5 | 3gvzA | 0.12 | 0.11 | 3.77 | 1.95 | CNFpred | -CTLWGAAGTASMEGSLLAKNRDWKPDHAQSLRLLHPEGYAYLGLYADNEPGIKAGVNQKGLAVVAAEASSLPRALR------GVLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLMQVEIGRYRLIRQQSGTLAHTNHYADTIGPSSQARLERIRFLLDQHPAHTLSEFERLSRDRHD----------------GPDNSLWRSG------REHTLAGWRIALPA-PRLQLTLANP | |||||||||||||
6 | 3gvzA | 0.13 | 0.12 | 3.99 | 3.19 | HHsearch-2 | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHPHGYAYLGLYADSEPGIKAGVNQKGLAVVAAEASSLPR-----ALR-GVLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLVEIGQHGYRLIRQQSGTLAHTNHYADTSLLDGQARLERIRFLLDQHPAHTLSEFERLSRDRHDGP----------------DNSLWR-----SG-REHTLAGWRIALPAGARLQLTLANP | |||||||||||||
7 | 3gvzA | 0.14 | 0.12 | 4.10 | 2.22 | Neff-PPAS | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHEHGYAYLGLYADNGSGIKAGVNQKGLAVVAAEASSLPRALRG------VLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLQVEIGGRYRLIRQQSGTLAHTNHYADTIGPSSQARLERIRFLLDQHPAHTLSEFERLSRDRHDGP----------------DNSLWRSG------REHTLAGWRIALPAGAPPRLQLTLA | |||||||||||||
8 | 3gvzA | 0.13 | 0.12 | 3.98 | 4.22 | HHsearch | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHPHGYAYLGLYADSEPGIKAGVNQKGLAVVAAEASSLPR-----ALR-GVLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLVEIGQHGYRLIRQQSGTLAHTNHYADTSLLDGQARLERIRFLLDQHPAHTLSEFERLSRDRHDGP----------------DNSLWR-----SG-REHTLAGWRIALPAGARLQLTLAN- | |||||||||||||
9 | 3gvzA | 0.14 | 0.12 | 4.21 | 1.98 | PROSPECTOR2 | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHEHGYAYLGLYADNGSGIKAGVNQKGLAVVAAEASSLPRAL------RGVLTRLLRDYGSLDEVASAADKLFAQARPVFLLLADAGGLQVEIGQHGRYRLQQSGTLAHTNHYADTSLLDSQARLERIRFLLDQHPAHTLSEFERLSRDRHDGPD----------------NSLWRS------GREHTLAGWRIALPAGAPPRLRDGDY | |||||||||||||
10 | 3gvzA | 0.14 | 0.12 | 3.93 | 1.38 | SAM | -CTLWGAAGTASE-GSLLAKNRDWKPDHAQSLRLLHPHGYAYLGLYAGSEPGIKAGVNQKGLAVVAAEASSLPR------LR-GVLTRLLRDYGSLDEVASAAK-LFAQARPVFLLLADAGGL-QVEIGQHRLIRQQSGTLAHTNHYADTSLLDGQARLERIRFLLDQHPAHTLSEFERLSRDRHDGPD----------------NSLWR-----SG-REHTLAGWRIALPA----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |