>PF05590 (258 residues) PPIDYRTGKPMMAGPWENRDLSLEDFQLDFLGQYTVKHAFINGINIDRCYPGAPPDHVQV VMMTTPTGFTTPGIVKEIANRPPQPYSQSDAFIGYEKSNTSNKYQPDGRTVLRNPDGTPQ KKVDKWWRFNPLCSAEFAGGNDIHFSIRSAASESIDSHIKDRVAWISAPDRDYKSNRFID APRTETRWGNPWTWYRAYMPTPVGDGVEMWMTPIGNTGYYITVYLNFIEAARQKNTEDYQ RARQLMDGILQSVVIQKQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | PPIDYRTGKPMMAGPWENRDLSLEDFQLDFLGQYTVKHAFINGINIDRCYPGAPPDHVQVVMMTTPTGFTTPGIVKEIANRPPQPYSQSDAFIGYEKSNTSNKYQPDGRTVLRNPDGTPQKKVDKWWRFNPLCSAEFAGGNDIHFSIRSAASESIDSHIKDRVAWISAPDRDYKSNRFIDAPRTETRWGNPWTWYRAYMPTPVGDGVEMWMTPIGNTGYYITVYLNFIEAARQKNTEDYQRARQLMDGILQSVVIQKQ | |||||||||||||||||||
1 | 5edfA | 0.13 | 0.10 | 3.51 | 0.65 | SPARKS-K | ------EQTSFNPEPTGFE----HTVTFDFQGTKVIPYGYLARYNATKWLSDTPINLIEISVYYKKTDQG-WVLEPYNQQNKAHFIDGLDSVDDIVIRKDACSLSTTGE---RLLTYGVKKPS--------------AYPEYEAYEDK----------------------RHIPENPYFHEFYYIKKGENPAIITHRNRINQTEDSYSTSVGSCING---FTVQYYPFIREKQQLTQELVGYHQQVEQLVQSFVNN-- | |||||||||||||
2 | 2xb3A | 0.14 | 0.08 | 2.76 | 0.66 | FFAS-3D | ---------------------------------------------------------------------------------------------GLQYVDSYDGYE------FLYPRGWVQVQVEDPVDV--VFHDIIETTENVSVVVNTVASTSPEEVGDRLLRNIIAPSESGRSSALIAATSQKADDKTYYILEYAVTLPAQQRHNLSSIAVSRGKVYTLSVSAP---------EERWPKVEDQFKTIVSSFTV--- | |||||||||||||
3 | 6e8aA | 0.12 | 0.07 | 2.34 | 0.41 | HHpred | ----------------------------------------------------ASGQPISLLSFSLPADMTDQS----------------------GKLGTQAN--N--MHVYSDPTGQ----------------------KAVIVIVGDNTDEALPVLANRLLEQQRSRDPQ---LQVVT-NKSIELKGHTLQQLDSIISAKGQT-AYSSIVLGKVDNQLLTIQVTLPA-------DNQQKAQTTAENIINTLVIK-- | |||||||||||||
4 | 1kanA | 0.11 | 0.09 | 3.38 | 0.56 | MUSTER | -----MNG-PIIMTR-EERMKIVHEIKERILDKYDVKAIGVYG--LGR---QTDGPY--MCVMSTEEAEFSGEWKVEVNFYSEEILLDYASQVESDWPLTHGQFF--SILPIYDSGGYLEKVYQTAKSVEA---QKFHDA------ICALIVEELFEYAGKWRNIRVQGPTTFLPSLTVQVAM----AGAMLIGLHHRICYTTSASVLTEAQSDLPSGYD-----HLCQFVMSGQLSDSEKLLESLENFWNGIQTERH | |||||||||||||
5 | 3lydA | 0.10 | 0.04 | 1.44 | 1.04 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------NIIGTVRRAATGALHNQRTELDQRATQ--------YAERGRTETTVDGFPAYHIEYAYRHHGTITIAQMITLVE-AVDIIQLTATCAGD-------QTADYWDTFRLMHADLTVQPH | |||||||||||||
6 | 6e8aA | 0.12 | 0.07 | 2.35 | 0.84 | HHsearch-2 | ----------------------------------------------------ASG--------------------------------QPISLMDGKLSFSL----PADMTDQSGKLGTQA------NNMHVYSDP--TGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQVVTN----KSIELKGHTLQQLDSIISAKGQTAYSIVLGKVD--NQLLTIQVTLP-------ADNQQKAQTTAENIINTLVIK-- | |||||||||||||
7 | 6nb6A1 | 0.08 | 0.07 | 2.59 | 0.74 | Neff-PPAS | -RCTTTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFDNPVDGIYFAATEKSNVVRGWVFGSTMNNKSQTNVVIRACNFELCDNPFFATHTMIFDNAFNCTFEYISDAFSNFKHLREFVFKNKDGFLYVYKGYQPIDVV------------RDLPSGFNTLKPIFKLP-----LGINITNFRAILTAFA----AYFVGYLKPTTFMLKYDEGTITDAV-------------------------- | |||||||||||||
8 | 6e8aA | 0.11 | 0.06 | 2.24 | 0.82 | HHsearch | --------------------------------------------------------------------------------AS----GQPISLMDGKLSFS----LPADMTDQSGKLGTQAN---NMHVY---SDP--TGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQ---VVT-NKSIELKGHTLQQLDSIISAKGQTAYSIVLGKV--DNQLLTIQVTL-------PADNQQKAQTTAENIINTLVIK-- | |||||||||||||
9 | 6e8aA | 0.12 | 0.07 | 2.34 | 0.76 | SP3 | -------------------------------------------------------------------------------------------------ASGQPISLMDGKLSFSLPADQSGKLGTQANNMHVYSDP--TGQKAVIVIVGDNTDEALPVLANRLLEQQRSRDPQLQ---VVTN-KSIELKGHTLQQLDSIISAKGQTASSIVLGKVDNQLLTIQVTL---------PADNQQKAQTTAENIINTLVIK-- | |||||||||||||
10 | 5oacA | 0.07 | 0.06 | 2.63 | 0.91 | PROSPECTOR2 | ASGSKNDYISDTPKFLDPSNVHIKATLKRGGKDYVLSTITQGRDQWEEGVKLAAKEMVHLVYIPFSGNTNWPAYVNVVRGAYGAELDANACICDVRTSPSIGVEKFIPFMTSYSIRANQATDLVNRIALLSMTNDVSNIPNAFTDVTLSSDRLDKNFNSNQLILEHSKCIEDSVRSHANEVDSYLIHEDIEIDSAKVHLKMNPAKI-------RENTIYLVRSHFQTSLEILQKAVAMEEKHQSADIA-----KVPAT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |