>PF05549 (271 residues) QRTFFSNAGVAIDATRALLGYLPPTRYDVPPATLPLDELYGQLHALHQNSLEWLTHINHN VESIIDFFNPNSLFSQGTPLSRLRDAITTLTRTVDDIHSVLTYTELSPEHASSSKAQTKF EVIERSLEALHQKVDKLALLAESNPAPPQVSPNSAKTPPLGAPEDLPVYQAVHPTTSCRT YGTIIFDGTSSRIPMDILGRPASTALRLDMTVATSSQNTTVSYKMFDDGYLLLSENVETA HKLQHCPNDCLALLHQRCQNFIYKIRSHGLC |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | QRTFFSNAGVAIDATRALLGYLPPTRYDVPPATLPLDELYGQLHALHQNSLEWLTHINHNVESIIDFFNPNSLFSQGTPLSRLRDAITTLTRTVDDIHSVLTYTELSPEHASSSKAQTKFEVIERSLEALHQKVDKLALLAESNPAPPQVSPNSAKTPPLGAPEDLPVYQAVHPTTSCRTYGTIIFDGTSSRIPMDILGRPASTALRLDMTVATSSQNTTVSYKMFDDGYLLLSENVETAHKLQHCPNDCLALLHQRCQNFIYKIRSHGLC | |||||||||||||||||||
1 | 6ezvX1 | 0.12 | 0.10 | 3.50 | 0.77 | SPARKS-K | TTQSAFLATTVITAQCHAILNTQFTPPTVKPD--WFDDLSKKLDSAKLVAKQWIDDLGPQVSASIPSSVIN----VSGIEATVKGMNKELSDWGVKMQAAHDDLVNGATNKTIIDLQTDIESMNNAIDNNRAAIEKLNKDLVYAQV--------------AVGVGI----------------------FMLVAGVALTVATAGTAAAV----------SGGIAAVGAAGVTWDYDSIAQEQKQKAQQIIALQGLSNASSAVVSAIETSTSV | |||||||||||||
2 | 2lp4A1 | 0.19 | 0.10 | 3.20 | 0.94 | FFAS-3D | --TFFDEADELLADMEQHLLDLVPE----SPDAEQLNAIFRAAHSIKGGAFTILQETTHLMENLLDEARRGEMQLN-------TDIINLFLETKDIMQEQLDAYKNSEEPD------------AASFEYICNALRQLALEAKGETPSAVTRLSVVAKSEPQDEQ----------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 4egwA | 0.14 | 0.07 | 2.51 | 0.40 | HHpred | --TIHSDKIKAIGRLHKLIKK-PRIV----FERGIGFLLYHILNEITRSYSRILMNLEDELEELEDKLLAGYDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPITTKEDRENFEDLYYDTLQLIDMSATYREVLTSMMD----------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 6etxG | 0.12 | 0.12 | 4.17 | 0.72 | MUSTER | QKLLYQALKNLVMQFRKVCNH-PELFERQETWSPKFIYRHGQIRVFNHSRDRWLRVLSPAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFL--SLKASYRLHQLRSWGAPEGESHQRY-LRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKLNGAPELAADWLNRRSQFFPEPAGGLWSI | |||||||||||||
5 | 4ev6A | 0.12 | 0.06 | 2.22 | 0.68 | CNFpred | --LLLTIHSDKIKAIGRLHKLISTKKPRIVFERGIGFLLYHILNEITRSYSRILMNLEDELEELEDKLLAGYDREVMEKILGLRKTLVYFHKSLIANRDVLVLLKRKYLPITTKEDRENFEDLYYDTLQLIDMSATYREVLTSM------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.16 | 0.15 | 4.92 | 0.67 | HHsearch-2 | KRPFDKKSNSALFR--AVGEGNAQLVAITDDYFEELRDLYQTYHVLVGDLIKFSAEITLDAEKVLNILEWLENPSNKDYLIQLAHYTAKLLFTPGELRSYLKGLVTAVAIAETDSWESFFVSVR---KAITVLFFIGVRCYEA---YPNTSLNEGVPSPMLSISNLTQEQQVEISLVNGAKNLVVSGPPQSGLNLTLRKAAPSGLDQSRIPFSER------KL-KFSNRFLPVSPFH--SH-LLVPASDLINKDLVKNVSFNAKDIQIDLR | |||||||||||||
7 | 6ezvX1 | 0.14 | 0.12 | 4.14 | 0.93 | Neff-PPAS | -QQTTQSAFLATTVITAQCHAILNTQFTPPTVKPWFDDLSKKLDSAKLVAKQWIDDLGPQVSASIPSSVINVSGIEAGMNKELSDWGVKMQAAHDDLVNGATNIQKTII-----DLQTDIESMNNAIDNNRAAIEKLNKDLVYA------------------------------QVAVGVGIFMLVAGVALTV---ATAGTAAAVSGGIAAVGAAGVTWGVLQNQIDDDYDSIAQEQKQKAEDQQ-QIIALQGLSNASSAVVSAIETSTSV | |||||||||||||
8 | 6ezvX1 | 0.14 | 0.11 | 3.68 | 0.54 | HHsearch | TQSAFLATTVITAQCHAILNQFTPP--TVKPDW--FDDLSKKLDSAKLVAKQWIDDLGPQVSAIPSSVINVSGI--EATVKGMNKELSDWGVKMQAAHDDLVNGATNIQK-TIIDLQTDIESMNNAIDNNRAAIEKLNKDLVYAQ---------VAV-------GVGI--------FMLVAGVAATAGT----AAAVSG-GIA-------AVGAA-------------GVTWLQNQIDDDYQEQKQKAEDQQQIVSAIETSTSVLSDFEI- | |||||||||||||
9 | 6ezvX1 | 0.09 | 0.08 | 3.06 | 0.61 | SP3 | --TQLNPTQQTTQSAFLATTVILNTQFTPPTVKPDFDDLSKKLDSAKLVAKQWIDDLGPQVSASIPSS-VINVSGIEATVKGMNKELSDWGVKMQAAHDDLVNGATNIQKTIID-LQTDIESMNNAIDNNRAAIEKLNKDLVYAQVAVGVGIFMLVAGVALTVAT--------------------------------AGTAAAVSGGIAAVGAAGVTWGVLQNQIDDDYDSIAQAEDQQQIIALQGLSNASSAVVSAIETSTSVLSDTKIA | |||||||||||||
10 | 6ezvX1 | 0.09 | 0.08 | 3.05 | 1.04 | PROSPECTOR2 | TQL--NPTQQTTQSAFLATTVINTQFTPPTVKPDWFDDLSKKLDSAKLVAKQWIDDLGPQVSASIPSS----VINVSGIEATVKGMNKELSDWGVKMQAAHDDLVNGATNKTIIDLQTDIESMNNAIDNNRAAIEKLNKDLVYAQVAVGVG--------------------------------IFMLVAGVALTVATAGTAAAVSGGIAAVGAAGVTWGVLQNQIDDDALQGLSNASSAVVSAIETSTSVLSDFETTWTKIAIETKEAPAV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |