>PF05231 (281 residues) LGLFVVAYILGCGFAQSLAIVPGTGISIWPPSGLFIATLVLASGYSWPWWVLGGCLAELF SNFLWFHSPLPAAVLIYIGNALEAAVGAWLVNRTCRRPVRLETLQEVLAFVVLAAGVAPT IGATVGSATLAWFGIQSQTFAAAWPLWWIGDATGILIVAPLALVVFQNWRGKSQLSAARW MEACVLGLIFLGVAALSLSGYLPFAYIIMPPLLWAAARFEFRGAAVALTLLALITAVFTI SGASQFAGDPESQKHKQIMLQLFLAISAFSALIVAAISRQH |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | LGLFVVAYILGCGFAQSLAIVPGTGISIWPPSGLFIATLVLASGYSWPWWVLGGCLAELFSNFLWFHSPLPAAVLIYIGNALEAAVGAWLVNRTCRRPVRLETLQEVLAFVVLAAGVAPTIGATVGSATLAWFGIQSQTFAAAWPLWWIGDATGILIVAPLALVVFQNWRGKSQLSAARWMEACVLGLIFLGVAALSLSGYLPFAYIIMPPLLWAAARFEFRGAAVALTLLALITAVFTISGASQFAGDPESQKHKQIMLQLFLAISAFSALIVAAISRQH | |||||||||||||||||||
1 | 6oh2A | 0.09 | 0.08 | 2.99 | 1.13 | SPARKS-K | LTVMTLVAAAYTVALRYTRTTAEELYF---STTAVCITEVIKLLISVGLLAKETRFKASLSENVELAKLSVPSLVYAVQNNMAFLALSNL------------DAAVYQVTYQLKIPCTALCTVLML------NRTLSKLQWISVFMLCGGVTLVQVLCSGFAGVYFEKVLKSSDTSL-WVRNIQMYLSGIVVTLAGTYLSDWFVIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTIASVG----LQIT------LSFALGALLVCVSIYLYGLPR-- | |||||||||||||
2 | 3m71A | 0.13 | 0.12 | 4.20 | 1.27 | FFAS-3D | -GYFGIPLGLAA-LSLAWFHLENLFDVLGIVASAVWILFILMSPVRFSFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLFSTLRVSELWQGGVF--EQKSTHPSFYLPAVAANFTSASSLALL--------GYHDLGYLFFGAG-MIAWIIFEPVLLQHLRISSLEPQFRATMGIVLAPAFVCVSAYLSINHGEVDTLAKILWGYGFLQLFGLNIGLWAFSFGLASMANSATAF-----YHGNVLQGVSIFAFVFSNVMIGLLVLMTIYKLTKGQ | |||||||||||||
3 | 5y78A | 0.09 | 0.09 | 3.23 | 1.00 | MUSTER | FFLWYFFNFIFNIANKRTLNMWKYPWVLLGVGALYCTFLWVLGLKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHAATELTFTWTGFITAMISNVAFVTRNITSKFTMVFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYN-----EVSYLCLDNV------SPVSFSIGNTIKRVIIIFGSIL----VFRTPVT------RLNFIGSTIAIIGTMLYSLAKAK | |||||||||||||
4 | 3rkoB | 0.12 | 0.12 | 4.23 | 1.45 | CNFpred | LSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLDNLLLMYLGWEGVGLCSYLLIGGAAAMKAFVVTRVGDVFLAFALFILYNEL-GTLNFREMVEMLMWATLMLLGGAVGKSAQLPLQTWLADAMGPTPVSALIHAATMVTAGVYLIARTHGLFLMT------PEVLHLVGIVGAVTLLLAGFAALVQRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC--KSIPLVYLCFLVGGAALSALPTAGFFSKD | |||||||||||||
5 | 6eznF1 | 0.10 | 0.10 | 3.78 | 1.17 | Neff-PPAS | --LYPGLMTTSAFIWHALRNWLGLAPLFSGVTAWATYEFTKEIKDASAGLLAAGFIAIVPGYISRSVAGSYDNEAIAITLLMVTFMFWIKAQKTGSIMHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQIPFVGFLPIRSNDPVSWPAFFFDTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMLTLTPVICVSAAVALSKIFDIYLDFKIKPAALLAKLIVSGSFIFYLYLFVFHSTWVTRTA | |||||||||||||
6 | 5y78A | 0.07 | 0.06 | 2.64 | 1.16 | PROSPECTOR2 | FFLWYFFNFIFNIANKRTLNMWKYPWVLLGVGALYCTFLWVLGLRLIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIA---QNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFY-----------HLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSIFRTPV----------TRLNFIGSTIAIIGTMLYSLAKAKLP | |||||||||||||
7 | 3ayfA2 | 0.11 | 0.10 | 3.76 | 1.13 | SPARKS-K | VSALFFVQTMFGALLAHYYTEPDSLAIFWIATAWLGMGIFIAPLVGFWALVVLVGGSMIGQWLGVNGLGRIWQIILVVGMLLWLFIVFRGVKRGLKRESDKGG---LIHLLFYSAIAVPFFYIFAFFI-----QPDTNFTMADFWRWWIIHIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHSPEVWIALGAVFSALVIPLTLLYKMMRDATFWFLISTAIWNLVGAGVFGFLINLPAVSYFEAHGHAAMMGVYGMFAIAVLLYS | |||||||||||||
8 | 5y78A | 0.13 | 0.11 | 3.98 | 1.26 | FFAS-3D | VGFYFFLWYFFNFIFNIANK--RTLNMWKYPWVLSTIQLGVGALKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVL---GEFFHPLTYLTLVPIVSGVALSAAFITAMISNVAFVTRNITSKFTMVAQNTYALITIISFFMELPFALLMEGFPPLVSAIAGVSKAKLFGSIMFCSLFY-----------HLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVT----------RLNFIGSTIAIIGTMLYSLAKAK | |||||||||||||
9 | 4he8F | 0.12 | 0.12 | 4.15 | 1.41 | CNFpred | LLIVTGVGFLIHVYAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLDSYPVMFIGWEGVGLASFLLIGFWYADSARKAFIVNRIGDLGFMLGMAILWALYGTLS-NPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMGPTPVSALIHAATMVTAGVYLIARSSFLYSVL-----PDVSYAIAVVGLLTAAYGALSAFGQTKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAL-LPQTRWHALIGALALGGLLSGFWSKDAILA | |||||||||||||
10 | 5ezmA1 | 0.12 | 0.11 | 3.86 | 1.16 | Neff-PPAS | ----PFHMWVTVVGYELFGLGEWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPERRSGSVF---------------YFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSK----------LPGYIVPVIPALGILAGVALDRL---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |