Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | NKQVRFLALDKCLPRRHFLQLLDIHPHDGSPVAPPSTPPQHPGRFPLQYDPEWLAITRALHGELTIGDRAAHAARDRGEAHYTPLIDEARAWVGEHVAALDVPANFVLTAPPHDGSPNWRNVPDQPFEYTNPQTAAFCEMLQVEN |
1 | 4pefA | 0.12 | 0.08 | 2.92 | 1.01 | SPARKS-K | | EGPTHFIALGKIGYKNAI-SYLDLPLKQKTD---------------LEYDKDWVCNLIMTWPAFSNKAQFPDLSYS-ISELLSKRTKELDKKIIELWEKYTSRRFYIEKIYNELNI----------------------------- |
2 | 4pefA | 0.17 | 0.10 | 3.41 | 1.73 | HHpred | | -GPTHFIALGKIGYKNAIS-YLDLPL---------------KQKTDLEYDKDWVCNLIMTWPAFSNKAQ-FPLSYSISELLSKR-TKELDKKIIELWEGLKII---------YDSDT---------------------------- |
3 | 4pefA | 0.15 | 0.08 | 2.80 | 1.11 | CNFpred | | EGPTHFIALGKIGYK-NAISYLDLPLK---------------QKTDLEYDKDWVCNLIMTWPAFSN--AQFPDLSYSISELLSKRTKELDKKIIELWEKY--------------------------------------------- |
4 | 4pefA | 0.11 | 0.08 | 2.74 | 3.48 | HHsearch-2 | | EGPTHFIALGKIGYKNAIS-YLDLPLK---------------QKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSESIELWEKYIGLKIIYDSDTFDQFTSRRFYIEKIYNELNI----------------------------- |
5 | 4pefA | 0.11 | 0.08 | 2.74 | 4.26 | HHsearch | | EGPTHFIALGKIGYKNAIS-YLDLPLK---------------QKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISIELWEKYIGLKIIYDSDTFDQFTSRRFYIEKIYNELNI----------------------------- |
6 | 4pefA | 0.12 | 0.09 | 3.20 | 2.11 | FFAS03 | | -GPTHFIALGKI-GYKNAISYLDLPLKQ---------------KTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIE-------LWEKYIGLKIIYDSDT---DIQFTSRRFYIEK---IYNELNI-- |
7 | 5k77A | 0.15 | 0.08 | 2.80 | 1.11 | CNFpred | | EGPTHFIALGKIGYK-NAISYLDLPLKQ---------------KTDLEYDKDWVCNLIMTWPAFSN--AQFPDLSYSISELLSKRTKELDKKIIELWEKY--------------------------------------------- |
8 | 2o2xA | 0.12 | 0.11 | 3.90 | 0.81 | SPARKS-K | | PGVWIERIGGRVFPPHLPALFLDRDGVDTDYPSDPAEIVLRPQ-------LPAIATANRAGIPVVVVTNQSGIARGYFG---WSAFAAVNGRVLELLREEGVF--VDVLACAYHEAGVGPLAIPDHPRKPNPGLVEAGKRLALDL |
9 | 4pefA | 0.11 | 0.09 | 3.21 | 0.98 | FFAS-3D | | -GPTHFIALGK-IGYKNAISYLDLPL---------------KQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIE-------LWEKYIGLKIIYDSDTFDIQFTSR--RFYIEK---IYNELNI-- |
10 | 1xpjA | 0.17 | 0.13 | 4.33 | 0.84 | MUSTER | | ---MKKLIVD----------LTQ----ANTSDYRNVLPRLD--------VIEQLREYHQLGFEIVI-----ARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYDEILVGKPWCGHDGFDDRAVRPSEFASMNLEEIHQLFEKEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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