>PF04641 (279 residues) MGCDGGTIPKRHELVKGPKKVEKVDKNAELAAKWKYCALSQEKLRRPIVACELGRLYNKD AVIEYLLDKSAERPNVEIAAHIRGIKDVKELNLTDNPAWEGDRRNAKGDCYEDMHRAMFI CPVVGLEMNGKHKFCYLQTCGCVFSERALREVKTEICHKCGDPFRDEDIVVLNGSKEEQE QLQKTMEERRAKAKAGKKSKKNKGLETVSKPVESEASSESTSTPVNGGGSSSGDSAPGPS GSSKTVKPVAAVGSKRSIQNMEGKSEAYKSIFTTHSSAK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MGCDGGTIPKRHELVKGPKKVEKVDKNAELAAKWKYCALSQEKLRRPIVACELGRLYNKDAVIEYLLDKSAERPNVEIAAHIRGIKDVKELNLTDNPAWEGDRRNAKGDCYEDMHRAMFICPVVGLEMNGKHKFCYLQTCGCVFSERALREVKTEICHKCGDPFRDEDIVVLNGSKEEQEQLQKTMEERRAKAKAGKKSKKNKGLETVSKPVESEASSESTSTPVNGGGSSSGDSAPGPSGSSKTVKPVAAVGSKRSIQNMEGKSEAYKSIFTTHSSAK | |||||||||||||||||||
1 | 4wz3B | 0.15 | 0.09 | 2.90 | 0.91 | SPARKS-K | ----RNPFDIDHKSKYLREAALEANLSHPETTPTLTCPIDSGFLKDPVIT-PEGFVYNKSSILKWLETKKEDPQSPELLIIVNRFEKLKNRLVQNARVAARQKEYTE-------IPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFLIANKDETGKKLSIDDVVVF-------DELYQ----------------------------------------------------------------------------------------------- | |||||||||||||
2 | 4wz3B | 0.16 | 0.09 | 3.11 | 1.49 | FFAS-3D | ---NPFDIDHKSKYLREAALEANLSHPET--TPTLTCPIDSGFLKDPVI-TPEGFVYNKSSILKWLETKKEDPQSPELLIIVNRFVETQTNYEKLKNRLVQNARVAARQKEYTEIPDIFLCPISKTLIK----TPVITAQGKVYDQEALSNFATGNKDETGKKLSIDDVVVF-------DELYQ----------------------------------------------------------------------------------------------- | |||||||||||||
3 | 2tmaA | 0.11 | 0.10 | 3.63 | 1.31 | Neff-PPAS | ---------RAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQ------------EIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL | |||||||||||||
4 | 4wz3B | 0.17 | 0.09 | 3.07 | 2.67 | HHpred | --NPFDIDHKSKYLEAALEANLS-HP---ETTPTLTCPIDSGFLKDPVITP-EGFVYNKSSILKWLETKKEDKPFPELLIIVNRKNRLVQN--ARVAARQKE---------YTEIPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFLTGNKDETGKKLSIDDVVVFDELY------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 4wz3B | 0.17 | 0.10 | 3.30 | 1.31 | MUSTER | -RNP--DIDHKSKYLR----EAALEANLSHTTPTLTCPIDSGFLKDPVITPE-GFVYNKSSILKWLETKKEDPQSPELLIIVNRFVETQTNYEKLKNRLVQNARVAARQKEYTEIPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFATGNKDETGKKLSIDDVVVF-------DELYQ----------------------------------------------------------------------------------------------- | |||||||||||||
6 | 4wz3B | 0.19 | 0.09 | 3.00 | 1.35 | CNFpred | --------------------------------TMLTCPIDSGFLKDPVITP-EGFVYNKSSILKWLETKKEDLTAKDLQPFPELLIIVNRFVET-KNRLVQNARVAARQKEYTEIPDIFLCPISKTL----IKTPVITAQGKVYDQEALSNFLTGNKDETGKKLSIDDVVVF----------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4wz3B | 0.17 | 0.09 | 3.08 | 2.67 | HHsearch-2 | -RNPFDIDHKSKYLEAALEANLS-HP---ETTPTLTCPIDSGFLKDPVITP-EGFVYNKSSILKWLETKKEDKPFPELLIIVNRKNRLVQN--ARVAARQKE---------YTEIPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFLTGNKDETGKKLSIDDVVVFDELYQ------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 4wz3B | 0.17 | 0.10 | 3.19 | 1.78 | Neff-PPAS | --------HKSKYLREAALEANLS---HPETTPTLTCPIDSGFLKDPVITPE-GFVYNKSSILKWLETKKEDPQFPELLIIVNRFVETQTNYEKLKNRLVQNARVAARQKEYTEIPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFLIATKDETGKKLSIDDVVVF-------DELYQ----------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4wz3B | 0.17 | 0.09 | 3.08 | 3.85 | HHsearch | -RNPFDIDHKSKYLEAALEANLS-H---PETTPTLTCPIDSGFLKDPVITP-EGFVYNKSSILKWLETKKEDKPFPELLIIVNRKNRLVQN--ARVAARQKE---------YTEIPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFLTGNKDETGKKLSIDDVVVFDELYQ------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 4wz3B | 0.17 | 0.10 | 3.29 | 1.13 | PROSPECTOR2 | -RNPFDIDHKSKYL----------REAALEANLSLTCPIDSGFLKDPVITP-EGFVYNKSSILKWLETKKEDPQSPELLIIVNRFVETQTNYEKLKNRLVQNARVAARQKEYTEIPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFATGNKDETGKKLSIDDVVVF------------------------------------------------------------------------------------------------DEL------YQ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |