Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FSLEKTFRTNFSMLVVHMWLCLRRLKAEGKEGIELGQYVYEIYNHDLEERVSKAGVNLLLSKWMRELEKVFYGNIVAFDTAMLPEAKPDDLQTAIWKNVFAEDGSSKLDAAALPAVMAFTRYVRRECTCLSLTDKEAMMSGNFLF |
1 | 5cwpA | 0.09 | 0.09 | 3.39 | 0.81 | SPARKS-K | | SDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPS-SSDVNEALKLIVEAIEAAVRALEAAERTGDEVRELARELVRLAVERNPSSE---EVNEALKKIVKAIQEAVESLREAKREKARERVREA |
2 | 4gytA | 0.11 | 0.10 | 3.73 | 0.86 | FFAS-3D | | LHLPK-YDDFVQSIELHGIMCGYLCAKKDEQSRNALLSMFS-VFSISQQQMNNFDFDESLVTRAQAFSEWCEGFTQGLTIAGFYEEESQDALQHLMEFAELDCESLEVGEEDERALMEVSEYTRMAVLRL----HSDLVLHE--- |
3 | 2w6dA3 | 0.12 | 0.07 | 2.42 | 0.29 | HHpred | | --QQGTGFPKF-MDSLNTFLTRERAIAELRQVRTLARLACNHTREAVARRIPLLEQDINRFNRLKNLQEDVIAQLQKYSNLLAY------------------------------------------------------------- |
4 | 1st6A | 0.06 | 0.06 | 2.68 | 0.70 | MUSTER | | APPGDAGEQAIRQILDEAGKAGELCAKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGE |
5 | 3zdrA | 0.13 | 0.10 | 3.35 | 0.60 | CNFpred | | -----TADTGMDVLTHAIEAYVSNM--ANDYTDGLAMKAIQLVFEYLPRAYQNG----ADELAREKMHNASTIAGMAFANAFL------GINHSLAHKLGAEF--------HIPHGRANTILMPHVIRYNAAK------------ |
6 | 1vt4I3 | 0.08 | 0.07 | 2.69 | 1.19 | HHsearch-2 | | YALHRSIVDHYNIPKQYFYSHGHHLKNIE---HPERMTLFRMVFLDFRFLEQKIRHDNASGSILNTLQQL-----KFYKPYICDN--DPKYERLVPKIEENLI---------------CSKYTDLLRIALMAEDEAIFEEAQVQR |
7 | 2h7oA1 | 0.12 | 0.12 | 4.12 | 0.70 | Neff-PPAS | | -----DMGGVLSDLDTMLVALDKAEREVDKDQLKSFNSLILKTYRVIEDYVKGNFMLSIVEPSLQRIQKHLDQTHSFSDIGSLVRA-HKHLETLLEVLVTLSQPVSSETYGFLNRLAEAKITLSQQLNTLQQQQESAKAQLSILI |
8 | 1vt4I3 | 0.09 | 0.07 | 2.64 | 0.81 | HHsearch | | YAIPPYLDQYFYSHIG------HHLKNIE---HPERMTLFRMVFLDFRFLEQKIRHWNASGSILNTLQQLKFYKP-----YICDN--DPKYEDFLPKIEENLICSKY------TDLLRIA---------LMAEDEAIFEQVQRG- |
9 | 1gpeA | 0.08 | 0.08 | 3.01 | 0.65 | SP3 | | SRASSAGAGQGQAVF------FANFTETFGDYAPQARDLLNTKLDQWAEETVARGGVTALKVQYENYRNWLLDEDVAFAELFMDTEGKINFDLWDLISVHILSSDPYLWQLNEFDLLGQAAASKLARDLTSQGAMKEYFAGETLP |
10 | 4g12A | 0.09 | 0.08 | 3.16 | 0.60 | PROSPECTOR2 | | ---SDRLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEADLIHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLHAVFGLLNSTPHSKAADSKPARTVRARAVLRATVAALSAADRC--------L |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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