>PF03772 (271 residues) LLLGQKKDISKDMYDDYASAGVIHILAVSGLHVGIILMLLQLILSPLFRFKHGNVFKTVL IVLFLWCFAIIAGLSPSVIRAVTMFSFLAVALNLKRKTSTLNTLFLSALVILLVEPQFLF SVGFQLSYLAVFSIILLQPKLSKLIPRPKYYISRILWGVFTVTIAAQIGVLPLSLFYFHQ FPGLFFVTNLIIIPFLGIILGYGLLCISLALLGILPSFIAEGFRLVIGFMNSVISWVAQQ NSFVFKEIPFSEIQTIVTYVLIGTILISIQR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | LLLGQKKDISKDMYDDYASAGVIHILAVSGLHVGIILMLLQLILSPLFRFKHGNVFKTVLIVLFLWCFAIIAGLSPSVIRAVTMFSFLAVALNLKRKTSTLNTLFLSALVILLVEPQFLFSVGFQLSYLAVFSIILLQPKLSKLIPRPKYYISRILWGVFTVTIAAQIGVLPLSLFYFHQFPGLFFVTNLIIIPFLGIILGYGLLCISLALLGILPSFIAEGFRLVIGFMNSVISWVAQQNSFVFKEIPFSEIQTIVTYVLIGTILISIQR | |||||||||||||||||||
1 | 6oh2A | 0.08 | 0.07 | 2.83 | 1.29 | SPARKS-K | YCLTVMTLVAAAYTVALRYTRTYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASLSENVPKELAKLSVPSLVYAVQNNMAFLALSNL--------DAAVYQVTYIPCTALCTVLMLSKLQWISVFMLCGGVTLVQW--KPAVVVAQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKGFFYYYVWFVIFLASVGGLYTSVVVKYTDN--------IMKGFSAAAAIVLSTIASVLL | |||||||||||||
2 | 3mktA | 0.09 | 0.08 | 3.25 | 1.13 | FFAS-3D | --------VAQTGMGFVDTIMAGGVVSIAASIWLPSILFGVGLLVPVVAQLNGAHQGLILALLVSVPIIAVLDVEEAMATKTVIFAVPAYLLFMSLTKPAMVIGFIGLLLNIPLNWIFVYGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFSIGAAVSIRVGHKAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCM-- | |||||||||||||
3 | 3rkoC | 0.12 | 0.11 | 3.79 | 1.36 | CNFpred | --------------------GISIHLAIDGLSLLMVVLTGLLGVLAVLC-YQGFFHLNLMWILGGVIGVFLAILFFFFWEMMLVPMYFLIALWGHKADGKTRITAATKFFIYTQASGLVMLIAILALVFVHYVWTFNYEELLNTPMS--SGVEYLLMLGFFIAFAVKMPVVPLHGWLP---DAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ | |||||||||||||
4 | 5y78A | 0.10 | 0.09 | 3.44 | 1.18 | Neff-PPAS | --------FNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLRTKPNVLIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSGEFFHLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDKNEKTLIAQNTYALITIISFFMELPFALLMEGFPVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVT-------RLNFIGSTIAIIGTMLYSLAKAK | |||||||||||||
5 | 5y78A | 0.14 | 0.13 | 4.42 | 1.09 | PROSPECTOR2 | ---------SPTLVHTLKVGFIFNIANLSTIQLGVGALYCTFLWVLGLRTKPNVSKKLGHTLGHAATCMSFSLVAISVKSAEPVFGAVGSALVLGEFFHPLTVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVF----------RTPVTRLNFIGSTIAIIGTMLYSLP | |||||||||||||
6 | 5y78A | 0.10 | 0.10 | 3.66 | 1.28 | SPARKS-K | VHTLKVGFYFFLWYFFNFIFNIANKRTLNMVLSTIQLGVGALYCTFLWVLGLRTIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSEFFHLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSKFTMVDFKEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTP--------VTRLNFIGSTIAIIGTMLYSLA | |||||||||||||
7 | 6eyuA | 0.10 | 0.08 | 2.85 | 1.12 | FFAS-3D | ------------VYEAITGFGSQPFILAYIITAMISGLLFLYLPRKLDVPQKFGIIHFFIVVWSGLMYTNFLNQLSDYAWPLILLALGLTAFHGADTKRYDLLGALLGAEFTLVITGLLAQAQYYVGVLLLLGVVYLLAKPFREIAEESSDGLARAYKILAGYIGIFFLSYPTVWYISGSLNILDPTQTSIALVVLPFFCKQVYGFLDMYLIHKAEL------------------------------------------------------ | |||||||||||||
8 | 3rkoB | 0.12 | 0.10 | 3.69 | 1.32 | CNFpred | ------------------GLSLTMLSVVTGVGFLIHMYASWYMRGEE---GYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTRVGDVFLAFALFILYLNFREMV-MLMWATLMLLGGAVGKSAQLP-----LQTWLADAMAPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQDIKRVLAYSTMSQIGYMFLALGVQA-WDAAIFHLMTHAFFKALLFLASGSVILACHHE | |||||||||||||
9 | 5ogeA | 0.11 | 0.10 | 3.62 | 1.15 | Neff-PPAS | ----------------VNLKDFNMNFVMLFVQSLVCTITLIILRILGFRSLNKTDAKNWFPISFLLVLMIYTSSIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGDPGYFWMFTNCITSALFVLIMRKRIKLTNFKD----FDTMFYNNVLALPILLLFSFCVEDWSSVNLTNNFSNDSLTAMIISGVASVGISYCSGWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPRNFLSILSIFIGFLSGIIYAVAKQK | |||||||||||||
10 | 5ezmA1 | 0.09 | 0.08 | 3.13 | 1.04 | PROSPECTOR2 | SSLDMRHLVGAEISREMFASGFHMWVTVVGYELLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLV-------TRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFS-----------ISRSKLPGYIVIPALGILAGVALDRL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |