>PF03715 (294 residues) FLSTVLKVMYLSFVRNARFVSPTTLPGINFMRRSLAEMFTLDTECSYQHAFLYIRQLAIH LRNAVTLKRKESYQAVYNWQFVNALKLWGDVLGATVNSELSALIYPLVTIIQGVIKLIPT AQWFPLRFHCIRVLINLTKSTRIFIPVLPFILEILQSATFNKKHTQISLNAMPFTCILRC TRPQLEELSSRTQVTENIFSTALEYLAAESYSLTFPDLVVPAIVNLKQYLKTCQVAATSR KLKQLLDLIIDNSRIIEAERMKINFSLRDAALIQSWETQMENNGTPLLTFYTNW |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | FLSTVLKVMYLSFVRNARFVSPTTLPGINFMRRSLAEMFTLDTECSYQHAFLYIRQLAIHLRNAVTLKRKESYQAVYNWQFVNALKLWGDVLGATVNSELSALIYPLVTIIQGVIKLIPTAQWFPLRFHCIRVLINLTKSTRIFIPVLPFILEILQSATFNKKHTQISLNAMPFTCILRCTRPQLEELSSRTQVTENIFSTALEYLAAESYSLTFPDLVVPAIVNLKQYLKTCQVAATSRKLKQLLDLIIDNSRIIEAERMKINFSLRDAALIQSWETQMENNGTPLLTFYTNW | |||||||||||||||||||
1 | 5wlcST | 0.11 | 0.11 | 3.81 | 1.22 | FFAS-3D | FTAVLLRHIIFLSNQNYLKNVQSFKRTQNALISILKSLSEKYNRELSEE----CRDYINEMQARYKKNHFD----ALSNGDLVFFSIIGILF--STSDQYHLVITPALILMSQFLEQFNSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVEPLDTKKRSTIIPLHTLSTMDTEAHPVDQCVSVLLNVMESLDATISTVWKSLPAFNEIILPIQQLLSAYTSKYSDAQLKKERKFTMKEIRKDAKFEARQREKNKESSDYHAKMAHIVNTINTEEGAEKNKYER- | |||||||||||||
2 | 4fgvA | 0.09 | 0.08 | 3.14 | 1.04 | CNFpred | LDVVDMEQIMTEKLARQVDGSEWSWHNCNVLCWAIGSISMA---MNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMYIVGQYPRFLKAH-----WKFLKTVVNKLFEFMHES----HEGVQDMACDTFIKIAKQCR-NEPFIEEIIRNIGKITCDLTPQQVHTFYEACGYMVSAQ----GNRNQQERLLAELMAIPNAAWDEIIKAATTIKIIGNIMKTNVSACSSIFFPQIGRLYNDMLQMYAATSQLISEAVARDATKMPKVRGLRTIKKEIL---KLVETFVEKA | |||||||||||||
3 | 5wlcST | 0.12 | 0.11 | 3.97 | 1.21 | HHsearch-2 | FTAVLLR--HIIFLSNQNYNVQSFKRTQNALISILKSLSEKYNRELSEECRDYINEMQARYKKNH--------FDALSNGDLVFFSIIGILFSTS--DQYHLVITPALILMSQFLEQINSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVEPLDFEIRSTIIPLHTLSTMD-TEAHPVDQCVSVLLNVMESLDATITVWKSLPAFNEIILPIQQLLSAYT--SKYSDFEK-PRNILNKVEKLTKFT--EHIPLALQNHKPVSIPTHAPKYEENFNPDKKEINKM | |||||||||||||
4 | 5wlcST | 0.12 | 0.11 | 3.86 | 1.76 | HHsearch | FTAVLLR--HIIFLSNQNYNVQSFKRTQNALISILKSLSEKYNRELSEECRDYINEMQARYKKNH-----------FDALDLVFFSIIGILFSTS--DQYHLVITPALILMSQFLEQINSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVEPLDFERRSTIIPLHTLSTMD-TEAHPVDQCVSVLLNVMESLDATITVWKSLPAFNEIILPIQQLLSAYT--SKYSDFEK-PRNILNKVEKLTKFT--EHIPLALQNHKPVSIPTHAPKYEENFDPDKAQLKK- | |||||||||||||
5 | 2bkuB2 | 0.09 | 0.09 | 3.22 | 1.00 | PROSPECTOR2 | TSTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQM--ISNPNARRELKPAVLSVFGDIASNIGA--DFIPYLNDIMALCVAAQNTKPENGT--------------LEALDYQIKVLEAVLDAYVGIVAGLHDKPALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGD----IAAMFPDGSIKQYGQDWVIDYIKRTRSGQLFSQATQLSL | |||||||||||||
6 | 6idxA | 0.10 | 0.10 | 3.51 | 1.11 | FFAS-3D | FATEFIIIVLTRLVESGTKLLSHYSEMLAFTLTAFLELMDHGSITFIKQIAGYVSQRSLAILESMVLNSQSLYQKIAEEIQTYAIALINALFLKAPEDKRQDMANAFAQLRSIILNHVPIKTEMAHQLYVLQVLTFLEERMMTKMDPRDIIFELRRIAFDAETEKRKAMYTKDYKMLGNPAMDFTQTDTYIRIVLEELTKMLCEILMFFTHDRAFEELFGICIQLLNKTWKEMRANKVMQVVREQITRALPSLDQFKSKLRSLSY-----SEILRLRQSER------------- | |||||||||||||
7 | 4gmxC | 0.10 | 0.09 | 3.31 | 1.03 | CNFpred | LNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSIS---GTMSEDTEKRFVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAH-----WNFLRTVILKLFEFMHE-----HEGVQDMACDTFIKIVQKCKY-EPFIQTIIRDIQKTTADLQPQQVH----FYKACGIII-SEERSVAERNRLLSDLMQLPNMAWDTIVE-SETVKIIANIIKTNVAVCTSMFYPQLGHIYYNMLQLYRAVSSMISAQVAAEATKTPKVRGLRTIKKEIL---KLVETYISKA | |||||||||||||
8 | 1vt4I | 0.15 | 0.14 | 4.68 | 1.04 | HHsearch-2 | FVEEVLRINYKFLMSPIRQPS--------MMTRMYIRLYNDNQVFAKLQPYLKLRQALLELRPAKNVKVQCNL-KNCNSPETVLMLLYQID--PNWTSNIKLRIHSLSIIAESIRDGLATWDVNCDKLTTIIELNVLSFPPSAHIPTILLSLIWFDVIKLHKQPKENIPKTFDSDLIPPYLDQYFYSHIERMTLFRMVDFRFLEQKIRHDSTAWNASGSLNTLQQLKFYKPYCDNPKYVNAILDFLPKIEE-----------NLICSKYTDLLRI-ALMAE-DEAIFEEAHKQV | |||||||||||||
9 | 1vt4I3 | 0.08 | 0.06 | 2.51 | 1.15 | HHsearch | ALHRSIVDHYNKTFDSDDLIPPHHLKNIEHPE--RMTLFRMV--------FLDFRFLEQKIRHDSTAWN----ASGS---ILNTLQQLKFYKPYICDPKYERLVNAILDF---LPKIEENLICSKY-TDLLRI----ALMAEDE----AIFEEAHKQVQ--RGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGG-GG-GGGGGGGGGGG------------GGGGGGGGGGGGGGGG---------------GGGGGGGGG--------GGGGGGGGGGGGG- | |||||||||||||
10 | 5xjcV | 0.12 | 0.11 | 3.98 | 1.10 | FFAS-3D | -----LKKSINGLINKVNISNISIIIQRGLLSRSVLQAQSASPIFTHVYAALILKRLILNFRKGYRRNDKQLCLTAS--KFVAHLEMLTLLLERPTDDSVE-VAIGFLKECGLKLT-----QVSPRGINIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDKMDPNFMENEEKYKAIKKEIVSFRRTIYLAIQSSLDFEECAHKLLMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGDTIHRLETNKLRNVAKMFAHLLTDSWSVLECIK-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |